Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2323 ATGTCTGGTGCTGTGGGAACTATTTCCTCCACAAACTCTCATTTGGAAGAAGAGCTTAAGAACAAAGAAACAAACAACAAAGTAGGTGGGGAGCCACACAAGCTTCCTCATAGTGATGGTGTCAACTCTGATGATGCTGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAAGTTGGAATGTGAAAGAGAATTGGATCTTGGCCCTCAATTCACCCTCAAGGAACAGTTGGAGAAAGATCAAGATGATCAAAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGAAGTGTTGATATGTCTGTGGTTGGAGGTGAAAGTAAAGATCCGGAGGTGAAGATGCTGAGCCTCACTGTTACATGCCCTGACAGACCTGACCTCACCCTGCCAATTCCGTTTACTAATGATCCTAAGAAAAGTCTCTTCATCCTTAAGGAAGGAAGCAAATGCCGTATGAAATTCACCTTCACTGTCTCCAACAACATTGTTTCTGGTCTCAAGTACACAAATGTTGTTTGGAAAACTGGTGTTAGAGTGGACAGTAGAAAAAAAATGGTGGGAACCTTTAGCCCCCAGAAGGAACCATACACATATGAATTGGAAGAAGAAAGTATCCCTTCTGGCATGTTTGCTAGGGGAACCTATGCTGCTAGAACCAAGTTTGTAGATGATGATCGAAAATGCTACTTGGATGTGAATTACTACTTTGAAATTCAGAAGAATTGGGCAACACCTCAATAA 738 0.4228 MSGAVGTISSTNSHLEEELKNKETNNKVGGEPHKLPHSDGVNSDDAEETEPEEDDDSKLECERELDLGPQFTLKEQLEKDQDDQSLRKWKEQLLGSVDMSVVGGESKDPEVKMLSLTVTCPDRPDLTLPIPFTNDPKKSLFILKEGSKCRMKFTFTVSNNIVSGLKYTNVVWKTGVRVDSRKKMVGTFSPQKEPYTYELEEESIPSGMFARGTYAARTKFVDDDRKCYLDVNYYFEIQKNWATPQ* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2323 245 MobiDBLite consensus disorder prediction 61 84 - -
Apr10g2323 245 MobiDBLite consensus disorder prediction 15 44 - -
Apr10g2323 245 PANTHER RHO GDP-DISSOCIATION INHIBITOR 7 243 IPR000406 GO:0005094|GO:0005737
Apr10g2323 245 MobiDBLite consensus disorder prediction 1 84 - -
Apr10g2323 245 PRINTS RHO protein GDP dissociation inhibitor signature 161 177 IPR000406 GO:0005094|GO:0005737
Apr10g2323 245 PRINTS RHO protein GDP dissociation inhibitor signature 178 193 IPR000406 GO:0005094|GO:0005737
Apr10g2323 245 PRINTS RHO protein GDP dissociation inhibitor signature 220 237 IPR000406 GO:0005094|GO:0005737
Apr10g2323 245 SUPERFAMILY E set domains 47 241 IPR014756 -
Apr10g2323 245 MobiDBLite consensus disorder prediction 45 60 - -
Apr10g2323 245 Gene3D Coagulation Factor XIII, subunit A, domain 1 63 243 IPR024792 -
Apr10g2323 245 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 7 243 - -
Apr10g2323 245 Pfam RHO protein GDP dissociation inhibitor 52 240 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2323 Apr-Chr10 35192687 35194486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2323 K12462 - gmx:100797593 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2323 10 35192687 35194486 Apr10g2323 10 35192687 35194486 ECH
Apr10g2323 10 35192687 35194486 Apr2g1659 2 22228735 22230169 PCT