Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2315 ATGGCGATGGATCCAGACGCACTGGCAAGGGCATTCGTTGAACATTACTACTCAACCTTCGACGCAAATCGTGCTTCTCTCGCTAATCTCTATCAAGAAGGTTCAATGCTTTCATTCGAAGGTCAAAAGATTCAAGGCTCTCACAACATCGTCGCCAAACTCACCTCTCTTCCCTTCCAACAGTGTCAACACTCCATCACCACCGTCGATTCCCAACCCTCCGGCGTCAACGGCGGCATGCTTGTCTTCGTTAGCGGCAACCTCCAACTCGCCGGCGAACAGCATGCCCTCAAGTTCAGCCAGATGTTCCATTTGATACCAACGCCACAGGGAAGCTATTATGTGTTGAATGACATATTCCGTTTGAACTATGCTTGA 378 0.4947 MAMDPDALARAFVEHYYSTFDANRASLANLYQEGSMLSFEGQKIQGSHNIVAKLTSLPFQQCQHSITTVDSQPSGVNGGMLVFVSGNLQLAGEQHALKFSQMFHLIPTPQGSYYVLNDIFRLNYA* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2315 125 ProSiteProfiles Nuclear transport factor 2 domain profile. 8 122 IPR018222 -
Apr10g2315 125 Gene3D - 1 125 - -
Apr10g2315 125 SUPERFAMILY NTF2-like 5 123 IPR032710 -
Apr10g2315 125 PANTHER NUCLEAR TRANSPORT FACTOR 2-LIKE 3 125 - -
Apr10g2315 125 CDD NTF2 4 124 IPR018222 -
Apr10g2315 125 Pfam Nuclear transport factor 2 (NTF2) domain 9 122 IPR002075 -
Apr10g2315 125 PANTHER NUCLEAR TRANSPORT FACTOR 2 3 125 IPR045875 GO:0006913
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2315 Apr-Chr10 35147891 35149184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2315 - - aprc:113850227 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2315 10 35147891 35149184 Apr2g1666 2 22323538 22326264 PCT