Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2310 ATGAAGAACCGGTATACGGTGCCGGAGAGACGGTGGTTCCTGGGTCTGGCCGTCGTGGGGTTGATCGGAGCAGCGGTGTTCATAGCCACCGCCATCCAAACCTCCATCCTCTGCCCCGCTTCGGTTGGGATCCTAACCCGAACCCGGGTGGACGACGATTTCAACCCGACACCGATGCAGCTTAGGGCGATACTCCACTACGCGACATCGCGCGTGGTTCCCCAACAATCGGTGTCAGAGATCAAGATCAGCTTAGACGTGATAAAATCACTGGGCCGGCCCTTCAAATTTCTGGTATTCGGATTGGGCCACGACTCACTCATGTGGGCCTCGTTCAACCCAGGTGGCACCACGCTGTTCCTCGAAGAGGACCCAAAGTGGGTCCACACCGTTCTCAAGGACGCACCGGGCCTCCGAGCCCATACGGTTCGGTACCGGACGCAACTTCGCGACGCCAACAAACTCCTCTCCTCGTACCGCTCCGAACCCACGTGTTCTCCTTCTAAGGCTTACCTCCGAGGCAACGAAGCGTGCAAGTTGGCGCTGGAGAATCTTCCGAACGAGGTTTACGAGACGGAGTGGGACCTGATAATGATCGACGCGCCCAAAGGGTACTTCGCGGAGGCGCCGGGGAGAATGGCCGCCGTGTTCTCCGCCGCAGTCATGGCGAGGAATCGGAAGGGATCGGGTGCGACGCACGTGTTCCTGCACGATGTGGATCGGAAGGTGGAGAAAGCTTATGCGGAGGAGTTTCTTTGTAAGAAGAATTTGGTGAAGGGTGTTGGAAGGATTTGGCACTTTCAGATACCCCCTTCTAACGACACTTCTTCTTCTCGTTTTTGCTGA 846 0.5709 MKNRYTVPERRWFLGLAVVGLIGAAVFIATAIQTSILCPASVGILTRTRVDDDFNPTPMQLRAILHYATSRVVPQQSVSEIKISLDVIKSLGRPFKFLVFGLGHDSLMWASFNPGGTTLFLEEDPKWVHTVLKDAPGLRAHTVRYRTQLRDANKLLSSYRSEPTCSPSKAYLRGNEACKLALENLPNEVYETEWDLIMIDAPKGYFAEAPGRMAAVFSAAVMARNRKGSGATHVFLHDVDRKVEKAYAEEFLCKKNLVKGVGRIWHFQIPPSNDTSSSRFC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2310 281 Pfam Polysaccharide biosynthesis 80 267 IPR021148 -
Apr10g2310 281 PANTHER OS11G0490100 PROTEIN 1 281 IPR006514 GO:0045492
Apr10g2310 281 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 281 - -
Apr10g2310 281 Gene3D Vaccinia Virus protein VP39 71 278 IPR029063 -
Apr10g2310 281 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 62 281 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2310 Apr-Chr10 35115275 35116559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2310 - - gmx:100789499 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2310 10 35115275 35116559 Apr2g1673 2 22386271 22387709 PCT