Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2303 ATGCATGGTATCAGGATAGTTGTTCTGGAACTGTATTTGCTGCTTTGGTTACTCCCACAAAAGTCAACTGGGTTGTCCAACATTCTTCTCAAAGTAGACATGCAAACTAGGAAGAAAGCCTTCAGGCGAAATGCTAATAAAGAGTGTGGCAGTCCCAGGGTTTCAAGAGCACAAAGGAAGGTCTCTGAAAATGTACGAGCAGCAGAAAAGAAAGTCACAGACTTAATTACATCATCTGCTAGAAAGAGTAAACCTTTCGGCACTCTTGAGAATAAAGCTGGAGAGCCCGGACACTCAACTGATTTAAACAATGAGTATGACTTTATGGATAATGGGAATTCCAATGCTTGTTTGGAAGATGATGCAGTGAATGGAGCAGGATTTGATATTTTGGGTTGTAACAAGCAAGCTGTTCATCTGGAGTCTGGAACTATATTTTCTCCTGGGTTTCACTTATCCAAAGGTTCTGGAGGAAAAGTTGTTGACAGAGTTGATTTTGTCAAAATTTTTCAGAACGATGACCAAAAGAGAATTTCTCCAGGTCAAGAAATAGAGTTGCAACAGGAGGATACAGTAGATGTAGATGGTCATGTTAGTCAAGACTCTGACACTGCGATGGAAGTAGATGCAAACAATTCATCCGACTACCCTAAATCTGGGAGATATGGTGATCAGATGCTTGCTTTAAACACAAAAAATGTGAATGGTTGCAATTCTGATTTTGACGGAAATGGTCTTTCCTTGGAAGTTTCTGCCATATATCTTGCCATGAAAAACTCAAAGCTGGAATGTGTTGATGAGCACGGTCAGGATTCCATGTCTTCTGATATGTGCCCAGAGGATGAAGAATTTGAAGATTTTGATGACTTTGACCCATACTTATTCATAAAGACCTTACCAGACTTGTCTACTGTGGTTCCAACTTTTAGACGATTGTTGCTACCTAAGCAGACACGGAGTTGCCCGTCTACCACCCTTGTCCTGGACTTGGATGAAACTTTGGTGCATTCTTCCCTGGAACCATGTGAGGATGTAGACTTCACTTTTCCTGTTAATTTCAATTGTGAGGAGCACATTGTCTTTGTACGCTGCCGCCCTCACCTCAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAGATTATTATATTTACAGCTAGTCAAAGTATTTATGCTGAGCAACTTCTAAATGTGCTTGATCCAAAGCGGAAGATATTTCGCCACCGTGTATACCGTGAATCCTGTGTTTATGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTTGGTCGTGACTTGGCGCATGTTATAATAATTGACAATTCCCCACAGGCATTTGGATTCCAAGTGGATAATGGAATACCGATTGAGAGTTGGTTTGATGATCGTTCAGACCAAGAATTGCTTTTATTACTTCCGTTCTTGGAGAGCTTGGTTGGAGTTGATGATGTCCGGCCACTAATTGCAAAGAAATTCAACTTGCGGGAGAAAATTGCTGCAGCTGTGCATCCTCTAAATACAAATAGAAGAGATTTCTTATCAGAATGA 1548 0.4076 MHGIRIVVLELYLLLWLLPQKSTGLSNILLKVDMQTRKKAFRRNANKECGSPRVSRAQRKVSENVRAAEKKVTDLITSSARKSKPFGTLENKAGEPGHSTDLNNEYDFMDNGNSNACLEDDAVNGAGFDILGCNKQAVHLESGTIFSPGFHLSKGSGGKVVDRVDFVKIFQNDDQKRISPGQEIELQQEDTVDVDGHVSQDSDTAMEVDANNSSDYPKSGRYGDQMLALNTKNVNGCNSDFDGNGLSLEVSAIYLAMKNSKLECVDEHGQDSMSSDMCPEDEEFEDFDDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSSLEPCEDVDFTFPVNFNCEEHIVFVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLESLVGVDDVRPLIAKKFNLREKIAAAVHPLNTNRRDFLSE* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2303 515 Coils Coil 512 515 - -
Apr10g2303 515 SMART forpap2 322 466 IPR004274 -
Apr10g2303 515 Pfam NLI interacting factor-like phosphatase 325 485 IPR004274 -
Apr10g2303 515 SUPERFAMILY HAD-like 313 489 IPR036412 -
Apr10g2303 515 ProSiteProfiles FCP1 homology domain profile. 319 478 IPR004274 -
Apr10g2303 515 Gene3D - 309 493 IPR023214 -
Apr10g2303 515 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 34 502 - -
Apr10g2303 515 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 324 487 IPR011948 GO:0016791
Apr10g2303 515 CDD HAD_FCP1-like 325 456 - -
Apr10g2303 515 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 34 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2303 Apr-Chr10 35060100 35064064 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2303 K17616 K12778 gmx:100804307 805.823