Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2300 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGCTCCACATTGCTAGAGACTTCATGTGGATTCCTGCTACAGGAATTGCAGATCATATGGGATGAAGTTGGAGAAGATAAGTTCGAAAGGGAGAAGGTTTTGCTAGATTTGGAGCAAGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAGCTCGTCTGCATCAAGAATTGGCTGAGGCTGAGGCTGAATTTACCCACCTTCTTTTGTCCCTTGGTGAAAGATCTCTACCTGGACGGCCAGAAAAAAGAGCGGGTACACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTTCAGGAAATGCGTATGAGGAAAGAAGATAGGTTAAAACAATTCCGCGCCGTGCAAGGTCAAATTCAAAAAATTTCTGCAGAAATTGCAGGTAACTCGGACAGTGAACCCTCAACCATTGTAGTAAACGAGAATGATCTTTCACTAAAAAGACTAGAGGAGTATCAGAGTGAATTGCAAAGACTTTACAATGAGAAGAATGAAAGACTTCAGCAAGTGGAGAAATATATCGACATGATACACAGCTTGTCCACGATCTTGGGAAAAGATTCTTCTGCGATCATCATGGAAGTTCATCCAAGCTTGAACGACTTGTGTGGAATAACAAAAAATATAAGCGACACTATTCTGGATAAACTCAATACCACAGTGGAGTCCCTCTTTGAAGAAAAGCAAAATCGGCTGGACAAGCTTCATCATTTAGGCAAAGCACTGTCAAATCTTTGGAATCTTATGGATACGCCATACAGTGAACGACAATCGTTTTCCCATGTAATCAATTTGTTGTCAGTCTCATCTGCGGAAGTAACAGATCCAGGAAGTCTTACTCTAGAAATAGTTCAGCAGACTGAAGCTGAAGTAAAGAGATTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAACTGGAGTTGATATGCAAGAAATCACACGTGGAGATTCCTTCACGGGCAGAGATGAACAATATAATTAACCTCATAAACTCAGGGGAGATTGACCATTCCGATCTCCTCATGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCATCTAGCAGGAAGGCTATAATGGAGAAAGTGGAGAAGTGGATGTTAGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAGCTATGGTAGATTTGCTAATAAAAATGACCAGGAGTTGGGAGGAAGAAAGAAATAAAATTTTCTTGTACGATCAGGTACCTCTAATGGCAATATTGGAAGAATATAATATACTAAGGCGAGAAAAGGAGGAGGATAAGAAAAGACAGCAGGTTAGTAAAAAGGTTCAAAACCAAGCAGTCATTGAGCGAGATATTACTTATGCGTCTAGACCAAGCACCGGCAGTAGGCGTCTTCCAAGTCGAAACCTGAATGGAGGTCTAGACTCCATGCCCCTGAACAGAAGGCTTTCTATGAGTATCCAACAGCTGGGATCCAACAGCATAAATTCAGGAAATCAAGGCATAGCATTCTTTAAGGATGGAAGGAATGTACAAAGAAAAAAGATTTTTGGTGAACCTGGCTTCGCTTCTCATACAAGAGACGAGACATCTTCTATGGTGTCAACACACGCTGGACCTTTTTCTCCTTAA 1779 0.4188 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRARLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALQEMRMRKEDRLKQFRAVQGQIQKISAEIAGNSDSEPSTIVVNENDLSLKRLEEYQSELQRLYNEKNERLQQVEKYIDMIHSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDTILDKLNTTVESLFEEKQNRLDKLHHLGKALSNLWNLMDTPYSERQSFSHVINLLSVSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSRAEMNNIINLINSGEIDHSDLLMSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRMPAMVDLLIKMTRSWEEERNKIFLYDQVPLMAILEEYNILRREKEEDKKRQQVSKKVQNQAVIERDITYASRPSTGSRRLPSRNLNGGLDSMPLNRRLSMSIQQLGSNSINSGNQGIAFFKDGRNVQRKKIFGEPGFASHTRDETSSMVSTHAGPFSP* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2300 592 MobiDBLite consensus disorder prediction 574 592 - -
Apr10g2300 592 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 592 IPR007145 GO:0000226|GO:0008017
Apr10g2300 592 MobiDBLite consensus disorder prediction 498 526 - -
Apr10g2300 592 MobiDBLite consensus disorder prediction 568 592 - -
Apr10g2300 592 Coils Coil 301 321 - -
Apr10g2300 592 Coils Coil 464 484 - -
Apr10g2300 592 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 517 - -
Apr10g2300 592 Gene3D - 372 505 - -
Apr10g2300 592 MobiDBLite consensus disorder prediction 498 518 - -
Apr10g2300 592 Coils Coil 159 190 - -
Apr10g2300 592 Coils Coil 53 80 - -
Apr10g2300 592 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2300 Apr-Chr10 35048828 35053306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2300 12 514 EF-hand Containing Proteins AT5G62250 39.258 2.76e-99 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2300 K16732 - gmx:100791080 1021.54