Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2289 ATGATGATGTTGGTCAACTCTGCCACGAAACAGGTTTTTCCCGTTGACTATGAAACAGAGGTGTCACAGCGTCTCGTAGAAGCTGTTCATTACGGTGACACAGACGCTTCGTTTGAGTATATTGCCAATCCTTTGGTGGACGTGAACTTCGTCGGAACGGTGTCGTTTAAGTCCAAAACGACGGAGATTGTGCTGCAGGACGAGTCGCCTCACCGAGTTCACTCGGTTTACGAGGAGTTCAAGACCGACGTCACTGCTCTGTTTCTGGCTGCGCATTCAGGGAATTTGACACTTCTGAGGAAGCTTCTGAATGTCGGAGCTAATGTAAATATGAGATTGTTCCGGGGCTATGCCACAACAGCAGCAGTAAGGGAAGGTCACCTCAAAGTGTTGGAGGTACTTATCAATGCAGGGGCATCACAACTTGCATGCGAGGAGGCATTATTGGAAGCAAGCTACTTGGGACAGGCAAGATTTGCTGACCTACTCATGCAATCCAACATGATCCGTCCTCAGGTTGCAATTCATGCTCTTGTCTCTGCATGTTGCAGAGGCTTTGTTGAGGTTGTTGATGTACTCATCAAGCATGGGGTGGATGTCAATGCAATTGATAGGACATTGCTTCAATCTTCAAAGCCATTTCTTCATGCTAATGTTGATTGCAATGCATTATTCGCTGCTGTTGTCAGCAGGCAGATTAATGTTGTTAGATTACTGGTACAGGTTGGCGTAAGGCTTGATATCAAGGTGAAACTAGGGGCTTGGTCATGGGACACAGATACAGGAGAAGAATTTCGTGTGGGTGTTGGACTAGCTGAGGCTTATCCTATCACCTGGTGTGCTGTGGAGTATTTTGAATCGACTGGTGCTATATTGCATATGCTTCTCTGCCACCTATCGCCTAATAGTTTGCACATTGGAAGGACCCTCTTACACCATGCTATCATTTGTAACAATGAAAAGACAGTAAATATACTTCTAAGTAGTGGCGCTGATCCAGAGATGGTAGTGCAGACTACTGAAGAGACCAATGTTCATCCTATTCATATGGCGGCGCGGTTTGGATCATGTAACATTCTTCAGTGCCTGGTTAATGCTAGTTGTAACTTGAACTCCCAAACAAAATCCGGAGACACAGCAGTGATGATCTGCACAAGGTATAAACATGAGAAATGCCTTGGAACCCTAGCATCAGCAGGTGCTGATATGGGTGTGGTAAATTCATCTGGTCACTGTGCAACTTCAATTTCAAACTCTCTTCAGTGGACTAAAGTCTTCCAGAAAGCAATTTTAGATGTAATTAGAGCTGGGAATGTTGTTAAATCAAGCAATGCCTCTAGATTTTCGGCTTTGTTATTTGCAACTAGTGTAAATGATTTAGAGGGTTTGAAGAGACTCATTGAAAACAAGAACATCAATCTGAATGAGCAAAATGCCAATGGATTTTCAGCTGCAATGATAGCTGCTGCAGGGGGTAATCTAGAGGCATTCAAGTTGCTTCTTTACGCTGGGGCTGATGTGACTAAGCTTAAAAACACGTATGGTTTAACAGCACTTAACCTCATAGATGTGAGCCAAAATGGCGTAGTGTTTCACAAAGTGATGCTTGAGTATGCACTTAAAAAGGGATGCAATGGTTCAATTGAGGTGAATCCTCTCCACCATGCAACACGCTATGGGGAAATGAACATTGTTCACAAACTACTAAAAGAAGGGTATGATGTCAATGCTTTTGATGGACAAGGATACACCCCTTTGATGTTAGCAGCAAGAGGATGCAGAGGTGAAATGTGTGAGCTTTTGATCTCATTTGGAGCCAAATGTGATATTCAGAATGGAAGACATGAGACAGCACTTTCACTAGCAAGAGAAAATGGCACAGGAAATGAAGCAGAACGTGTGATTATGGATGAACTAGCTCGAAGATTAGTATTGTGTGGTAGTCGTGTGAAGAAGCATACAAAGTGTGGTAAAGGTTCACCTCATAGCAAGTTACTACTAATGGTGGGGGCTGCTGGAGTTTTGCGTTGGGGAAAATCAAGTAAAAGAAACGTTATTTGTAAGGAAGCTAAGGTTGGAGCTAGTGAGAAATTTCGATGGAACCGAAGGAGGAAGTTTGATGTTGATGAACCAGGAATTTTCTATGTTGTTACTACAAAAAATAAGGAATTCCATTTTGTATGTGAAGGTGGGGTTGAAATGGCTCACTTGTGGGTAAGGGGGATTAGATCAGTAACTAAAGAAGCGATTTTTGGTCTAAGAGCTGGTGTTTGA 2274 0.431 MMMLVNSATKQVFPVDYETEVSQRLVEAVHYGDTDASFEYIANPLVDVNFVGTVSFKSKTTEIVLQDESPHRVHSVYEEFKTDVTALFLAAHSGNLTLLRKLLNVGANVNMRLFRGYATTAAVREGHLKVLEVLINAGASQLACEEALLEASYLGQARFADLLMQSNMIRPQVAIHALVSACCRGFVEVVDVLIKHGVDVNAIDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRLLVQVGVRLDIKVKLGAWSWDTDTGEEFRVGVGLAEAYPITWCAVEYFESTGAILHMLLCHLSPNSLHIGRTLLHHAIICNNEKTVNILLSSGADPEMVVQTTEETNVHPIHMAARFGSCNILQCLVNASCNLNSQTKSGDTAVMICTRYKHEKCLGTLASAGADMGVVNSSGHCATSISNSLQWTKVFQKAILDVIRAGNVVKSSNASRFSALLFATSVNDLEGLKRLIENKNINLNEQNANGFSAAMIAAAGGNLEAFKLLLYAGADVTKLKNTYGLTALNLIDVSQNGVVFHKVMLEYALKKGCNGSIEVNPLHHATRYGEMNIVHKLLKEGYDVNAFDGQGYTPLMLAARGCRGEMCELLISFGAKCDIQNGRHETALSLARENGTGNEAERVIMDELARRLVLCGSRVKKHTKCGKGSPHSKLLLMVGAAGVLRWGKSSKRNVICKEAKVGASEKFRWNRRRKFDVDEPGIFYVVTTKNKEFHFVCEGGVEMAHLWVRGIRSVTKEAIFGLRAGV* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2289 757 ProSiteProfiles Ankyrin repeat region circular profile. 581 612 - -
Apr10g2289 757 Gene3D - 302 429 IPR036770 -
Apr10g2289 757 ProSiteProfiles Ankyrin repeat profile. 581 613 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 173 202 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 376 405 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 548 577 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 82 111 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 306 335 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 480 509 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 114 143 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 219 248 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 581 610 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 343 372 IPR002110 GO:0005515
Apr10g2289 757 SMART ANK_2a 446 476 IPR002110 GO:0005515
Apr10g2289 757 ProSiteProfiles Ankyrin repeat profile. 480 512 IPR002110 GO:0005515
Apr10g2289 757 ProSiteProfiles Ankyrin repeat region circular profile. 548 579 - -
Apr10g2289 757 SUPERFAMILY Ankyrin repeat 25 253 IPR036770 -
Apr10g2289 757 ProSiteProfiles Ankyrin repeat region circular profile. 480 507 - -
Apr10g2289 757 Pfam Ankyrin repeats (many copies) 459 501 IPR002110 GO:0005515
Apr10g2289 757 Pfam Ankyrin repeats (many copies) 307 364 IPR002110 GO:0005515
Apr10g2289 757 Gene3D - 13 169 IPR036770 -
Apr10g2289 757 SUPERFAMILY Ankyrin repeat 307 634 IPR036770 -
Apr10g2289 757 Gene3D - 430 530 IPR036770 -
Apr10g2289 757 ProSiteProfiles Ankyrin repeat profile. 82 114 IPR002110 GO:0005515
Apr10g2289 757 Gene3D - 171 260 IPR036770 -
Apr10g2289 757 Gene3D - 532 641 IPR036770 -
Apr10g2289 757 ProSiteProfiles Ankyrin repeat profile. 177 205 IPR002110 GO:0005515
Apr10g2289 757 ProSiteProfiles Ankyrin repeat region circular profile. 82 112 - -
Apr10g2289 757 ProSiteProfiles Ankyrin repeat profile. 306 338 IPR002110 GO:0005515
Apr10g2289 757 Coils Coil 457 480 - -
Apr10g2289 757 PANTHER ANKYRIN DOMAIN PROTEIN 7 752 - -
Apr10g2289 757 ProSiteProfiles Ankyrin repeat region circular profile. 306 332 - -
Apr10g2289 757 Pfam Ankyrin repeats (3 copies) 535 612 IPR002110 GO:0005515
Apr10g2289 757 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Apr10g2289 757 PANTHER ANKYRIN REPEAT-CONTAINING 7 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2289 Apr-Chr10 34989472 34994341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2289 307 401 Miscellaneous Gene Families AT1G05640 34.375 3.93e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2289 - - gmx:100795638 1313.13