Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr10g2282 | ATGTGGACAGTTCTACGAACTCGATCGTGGTTGCGTTATTCATCGAATTCACAGGCCCTTCTTCAGCCATGGAATCTAAGGTTTTCCTCTTTGACGGCCGTTGACGGCGGCGACAACCGCAAATGCCTTCTGGATCTGCAGGAGATCGAGAATGTTCTGACGGACATTAAAGCTGACGACGTGAAGGTGATACCCGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTGCTCGCCACTGGCAGGTCCTCGTGGCACGTCAAGAACATCGCTCAAGCCCTAATTTACAAGGCTAAACAGAAACAGAGAGGAGTTGAACGAATGATTCTACCTAGTGTGGAAGGACAAGCAGGAGGAAAGTGGATTGTTATTGATTCTGGTAAAGTGATAGTTCATGCCCTTGATGAGAAGGCTAGAGCTTACTACAATTTGGAGGGACTTTGGACCCCAGGGACAATTCAAAATGAACCTATTGAGGATTTACACAAAGCTTTGGTGAAGGTTCGTCGGAAAAACAATTCGAAGAAACCTGCACAAAAGAATGCTTAA | 549 | 0.4663 | MWTVLRTRSWLRYSSNSQALLQPWNLRFSSLTAVDGGDNRKCLLDLQEIENVLTDIKADDVKVIPVPKHCDWADFMVLATGRSSWHVKNIAQALIYKAKQKQRGVERMILPSVEGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTPGTIQNEPIEDLHKALVKVRRKNNSKKPAQKNA* | 183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr10g2282 | 182 | Hamap | Ribosomal silencing factor RsfS [rsfS]. | 39 | 149 | IPR004394 | - | |
| Apr10g2282 | 182 | Gene3D | Beta Polymerase, domain 2 | 44 | 162 | IPR043519 | - | |
| Apr10g2282 | 182 | Pfam | Ribosomal silencing factor during starvation | 48 | 148 | - | - | |
| Apr10g2282 | 182 | SUPERFAMILY | Nucleotidyltransferase | 47 | 155 | IPR043519 | - | |
| Apr10g2282 | 182 | PANTHER | MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 | 12 | 173 | - | - | |
| Apr10g2282 | 182 | PANTHER | IOJAP SUPERFAMILY ORTHOLOG | 12 | 173 | IPR004394 | - | |
| Apr10g2282 | 182 | TIGRFAM | rsfS_iojap_ybeB: ribosome silencing factor | 47 | 148 | IPR004394 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr10g2282 | - | - | gmx:100500386 | 300.827 |