Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2279 ATGGGTCAAGAAGACAGTGATAATGCAGCCAAGCAAAAGGCCATTGATGATTGGCTTCCTATTACTGCTACCAGAAATGCCAAATGGTGGTATTCAGCGTACCATAATCTCACGGCCATGGTTGGTGCTGGTGTCCTCAGCCTTCCTTATGCCATGTCAAATATGGGTTGGGGTCCCGGCGTTGTGGTGCTGATCTTGTCATGGATCATCACCTTGTACACGCTGTGGCAAATGGTTGAGATGCATGAAATGGTGCCTGGGAAGAGATTCGATAGGTATCATGAGTTGGGTCAGCATGCATTTGGAGAGAAGCTGGGTCTTTGGATCGTGGTTCCTCAACAGATTGTTGTTGAAGTTGGCACGTGCATTGTCTATATGGTCACTGGTGGCAAATCATTGAAGAAAGTTCATGATACCCTTTGTCCTAGTTGCAAAGATATCAAGACCACATATTGGATCATGATCTTTGCTTCTGTTAACTTCGTTCTTTCCCAATGCCCCGACTTCAATTCCATCTCTTTCGTCTCTTTCTGTGCAGCTGCGATGTCTTTGACTTACTCAACCATTGCATGGGTTGCTTCTGTAAAGAAAGGTGTTACACCAGATGTGAGCTATAGCTCAAGAGCCCACAGCACCGCTGATGCTGTGTTCAACTTCCTTAGTGCCTTGGGAGACGTAGCATTTGCTTATGCAGGTCACAATGTGGTTCTAGAAATTCAAGCAACAATGCCTTCAACCCCCGAGGTTCCTTCCAAGGAACCCATGTGGAGAGGAGTTATTTTGGCATACATAGGAGTTGCTTACTGCTACTTCCCTGTTGCCTTCATTGGATACTACATGTTTGGAAAAGCAGTTGATGATAACGTCCTTATCACACTACAACGCCCTGCTTGGCTCATTGCTGCTGCTAACTTGTTTGTCCTTATCCACGTTATTGGAGGCTACCAAGTATTTGCCATGCCAGTGTTTGATATGATAGAAACCTACTTTGTTAAGACCTTAAATTTTCCACCCTCTCGTGCACTCAGAGTAACAGCTCGCATTGTATTTCTTGCATTGACAATGTTTATAGCAATATGCATCCCATTCTTTGGTTCTCTTCTTGGATTCCTTGGAGGCTTTGCATTTGCCCCAACAACATACTTTCTACCCTGTGTCATGTGGCTTAGGCTCAAAAAGCCCAAGAGATTTGGTTTGTCGTGGACGATCAACTGGATATGCATCATTATTGGGGTACTGTTGATGACTTTATCTCCAATTGGTGCTATGAGGAATATCATCGTATCAGCAAAAGACTACAAGTTCTTCTCGTAA 1314 0.4429 MGQEDSDNAAKQKAIDDWLPITATRNAKWWYSAYHNLTAMVGAGVLSLPYAMSNMGWGPGVVVLILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQIVVEVGTCIVYMVTGGKSLKKVHDTLCPSCKDIKTTYWIMIFASVNFVLSQCPDFNSISFVSFCAAAMSLTYSTIAWVASVKKGVTPDVSYSSRAHSTADAVFNFLSALGDVAFAYAGHNVVLEIQATMPSTPEVPSKEPMWRGVILAYIGVAYCYFPVAFIGYYMFGKAVDDNVLITLQRPAWLIAAANLFVLIHVIGGYQVFAMPVFDMIETYFVKTLNFPPSRALRVTARIVFLALTMFIAICIPFFGSLLGFLGGFAFAPTTYFLPCVMWLRLKKPKRFGLSWTINWICIIIGVLLMTLSPIGAMRNIIVSAKDYKFFS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2279 437 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 432 - -
Apr10g2279 437 PANTHER OS05G0424000 PROTEIN-RELATED 7 432 - -
Apr10g2279 437 Pfam Transmembrane amino acid transporter protein 26 422 IPR013057 -
Apr10g2279 437 Gene3D Amino acid/polyamine transporter I 23 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2279 Apr-Chr10 34928137 34930756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2279 9 437 Organic Solute Cotransporters AT1G24400 75.991 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2279 - - gmx:100786115 752.666