Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2271 ATGTTCAAACAGATATTAAGTAAACTCCCTCGAAAGTCATCAAAAGGTTCGGAGCATCGTGAACATGGTGGAAGTGGAAGAAGCCATGGTGTTACCACTTCAAAAAGTAGTGATCTTGTTGTGCCAGGAAGTAGCAAACCTGGAAATTCTTCTGCTTTGAATGTGGGTCATAATCATGGTAACAGGGTTCCATTACCATTGGTTGTGAAAGAGAACCCAAATGGGAATTTCAGTTCTTATGAAGCATCATTGCCTGCGTTCAGGGATGTTCCCAATTCTGAGAAGCCAAGCTTGTTCATCAAGAAGCTTAGGATGTGCAGTGTGGTGTTTGACTTCACTGACCCCGCAAAGCACCTCAAAGAGAAGGAAATTAAGAGACAGACCTTGGTGGAACTGGTGGATTATGTGACTTCTGCTAATGCTAAGTTCACTGAGAATGTGATGCAAGAAGTTGTGAAAATGGTGTCTGCAAATATATTCAGGACGCTTAGTCCTCAACCGCGCGAGAATAAGATTGTTGATGGCCTTGATGTGGAGGAGGAGGAGCCTTCAATGGATCCTGCTTGGCCTCATTTGCAAATTGTGTATGAGCTTTTTCTGAGATTCGTGGCATCGCCTGAGCTGGATGCAAAGCTGGCTAAGAGGTATATTGATCAGTCCTTCATTTTGAGGCTGTTGGATTTGTTTGACTCCGAAGATCCGAGAGAGCGCGAGTACTTGAAGATGACTTTGCATCGCATATATGGCAAATTCATGGCGCATCGACCTTTCATCAGGAAGGCCATCAATAATATCTTTTTTAATTTTATTTTTGAGACTGAGAAGCACAATGGAATTGCTGAGTTCTTGGAAATTCTTGGGAGTATCATTAATGGTTTTGCACTGCCATTGAAAGAAGAGCATAAACTATTTCTTGTTCGGATACTGATTCCCCTGCACAAGCCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCATTACCCAATTTGTGGAGAAAGACTGTAAGCTTGCTGATACAATTATTAGGGGATTATTGAAGTACTGGCCCATAACAAATAGTTCAAAGGAAGTTATGTTCCTAGGTGAGTTGGAAGAAGTCTTAGAAGCAACTCAACCCCCAGAATTCCAGCGCTGTATGGTGCCATTATTTCGTCGCATTGCCCGTTGTTTGAATAGCCCCCATTTTCAGGTCGCAGAAAGAGCTTTGTTCTTGTGGAACAATGATCACATCTTAAACTTAATCAAACAGAATCGAAAAGTGATACTGCCCATCATCTTCCCTGCATTGGAGAAAAATGCTAGAAGTCATTGGAACCAGGCTGTTCATAGTTTGACTTTAAATGTACGGAAAATATTTAATGATCTTGATCCTGATCTATCTAAAGAATGCTTACAAAAATTTGAGGAAGATGAATCAAAGGAAAGTGAAGTCATAGCAGGGCGTGAAGCCACTTGGAAACGCATGGAGGAGCTCGCCGCAAAGAAAGCTGCAAGCGGCGAAGCAGTGCTTATTGGTAAAGCACCAACTCGCAGCTCTGCAGGTTAG 1554 0.4215 MFKQILSKLPRKSSKGSEHREHGGSGRSHGVTTSKSSDLVVPGSSKPGNSSALNVGHNHGNRVPLPLVVKENPNGNFSSYEASLPAFRDVPNSEKPSLFIKKLRMCSVVFDFTDPAKHLKEKEIKRQTLVELVDYVTSANAKFTENVMQEVVKMVSANIFRTLSPQPRENKIVDGLDVEEEEPSMDPAWPHLQIVYELFLRFVASPELDAKLAKRYIDQSFILRLLDLFDSEDPREREYLKMTLHRIYGKFMAHRPFIRKAINNIFFNFIFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVPLFRRIARCLNSPHFQVAERALFLWNNDHILNLIKQNRKVILPIIFPALEKNARSHWNQAVHSLTLNVRKIFNDLDPDLSKECLQKFEEDESKESEVIAGREATWKRMEELAAKKAASGEAVLIGKAPTRSSAG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2271 517 MobiDBLite consensus disorder prediction 27 57 - -
Apr10g2271 517 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 84 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr10g2271 517 SUPERFAMILY ARM repeat 96 477 IPR016024 -
Apr10g2271 517 PIRSF PP2A_B56 1 515 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr10g2271 517 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 515 - -
Apr10g2271 517 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 515 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr10g2271 517 MobiDBLite consensus disorder prediction 12 26 - -
Apr10g2271 517 Gene3D - 91 494 IPR011989 -
Apr10g2271 517 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2271 Apr-Chr10 34883184 34888186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2271 K11584 - gmx:100811438 919.072