Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2269 ATGGCACATTCTTTGTACACCAATCTGCCTCTTAACCTTCCCACATACAGCTATTTTCGTCCCCATTTGTCCAAGTTGAAGCCTGTTAGGGTGATGATGGAAGACGCAAGAAAAAAGCTTCACCATGTTCCAAGACACAACAAGCACCAAAAGATAGTTCCCCCTTCTCCACCCATAGGGTTATGGGACAGATTTCCTACAGCAAGAACAGTGCAAGAGATGATGGAGACAATGGAGAGAATGATGGAAGACCCATTTGCATTGAGCACACTTGAATGGCCTTCTTCTCCCCTACCGAGCGAGGGAGTTGGTGGGTATAGGAGAAGGGGAAGAACACCATGGGAGATTAAGGAAGGAGAGAGTGAATACAAAATGAGGTTTGATATGCCTGGGATGAATAAAGAGGATGTTAAGGTTTGGGTGGAGGAGAAGATGCTATTGGTTAAGGCTGAGAAAAAGAGCAATGATGAACAACAACAAGAAGAAGAATGGTCTTCTAAGAGCTATGGAAGGTATAGCAGTAGAATCGTTTTGCCAGATAATGTTCAGTTTGAGAAAATTAAGGCAGAGGTTAAGGATGGTGTTCTTTACATAACCATACCTAAGGCTACCACCACCTATTCAAACATCCTCGATATACGAGTTCAATAA 651 0.4301 MAHSLYTNLPLNLPTYSYFRPHLSKLKPVRVMMEDARKKLHHVPRHNKHQKIVPPSPPIGLWDRFPTARTVQEMMETMERMMEDPFALSTLEWPSSPLPSEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGMNKEDVKVWVEEKMLLVKAEKKSNDEQQQEEEWSSKSYGRYSSRIVLPDNVQFEKIKAEVKDGVLYITIPKATTTYSNILDIRVQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2269 216 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 105 216 IPR002068 -
Apr10g2269 216 CDD ACD_sHsps-like 115 202 - -
Apr10g2269 216 SUPERFAMILY HSP20-like chaperones 98 213 IPR008978 -
Apr10g2269 216 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 35 216 - -
Apr10g2269 216 Gene3D - 62 215 IPR008978 -
Apr10g2269 216 Pfam Hsp20/alpha crystallin family 115 207 IPR002068 -
Apr10g2269 216 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 35 216 IPR044587 GO:0009408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2269 Apr-Chr10 34876052 34877318 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2269 K13993 - gmx:100811966 325.479