Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2268 ATGGGTGAATCAACGACTTGTCTTGTGCGATCTTTCTCTACTCCTTCTGACACTAGTTGCGTGGTTCAAGAGGGAAACCCTATGCGTATGCTTGGAGAATCTATCTCTTTTGGAAGGTTTATAACAGAAGGCCTTGATTGGGAGAAATGGTCAGCATTCTCACACAAACGCTATGTAGAAGAAGCTGAAAAGTATTCGAAGCCGGGTTCGGTGGCAGCGAAGAAAGCTTACTTTGAGGCTCATTACAAGAAGAAGGCTGCAGAGAGAGCAGCTGCATTGATCCAAGAAGCAAATTCTCAAGCTAATGGAACTTTTGATTCGAAAACTCTGGAAGGAAACTGCACTGACATATCCACTGAGATGAATTCAAAAGCAGACAATGTTGTGATTGTCAATGAACAAGAAGATAAAGAAACTGTTAATTGCCAAGTTGTTGAATGTGCTGATATGAACCAATACAAATGTGACTCTGGACAAAGTGATTTAGTCATTTCCAATGTGGAAGGAACCGAGGATGTGCCACATCCTCACGTTGATACAAATCTCAATATGGAATGTTCTGCTCTTGTTGATAATTCTAACCAGTTTCATCATGTTGAAGTTCATAATTCTAACCTGGTTGATCATCACACCGTTGATCGGGAAGAAAATTCTTCAAAATTATCAACTGAAACAATGGCGGCCAAACGTCCTCATTCTCTTGATGAAGGGAAGGTTGCTGTAGGTGTATCACTCAGTAGTGAAATACACAATGGTTCAAAAGGTAAGAAATCTGATGGAGACTTGGTTGAGAAGAAGAGACCAAATGCACGGTCGCTTCGCATGTCAATAAATCTTCCCTCTGGCACTGGTGAAAAGTGCAACAAAGTTGCTGCACTTTCACAGTCCAGAAATGGCTTAAACAATTTTTCAACAAGTAAGAAGTCTGTTGGAGGCTCAGTTGATAAGAAGAGAATAACTGCGCCATCACTTTACATGTCGAACAATCTCCCTTCCGGCACGCGTGTAACGAGCAAAACAGCTACTTCAGCTGTTAAACCCAGAAATGGAACAAACTTTGCTGCAAGAAGTATGAAATCTATTGGAGATTCGGTGGAGAAGAGACCAACTTTAAGGTCACTCAACACACACTACATGTCGATCAATCTCGCTTCTGGGCTAGGTGAAACAAGTAAAACAACTTCAGCAATTGAACAGAATAGAATTAAGAAAATTCATTCTCATTTGCCGAAAGATAATCCATTGGCATTGAGAACATCAACTAAGGCATCTCGTGGTTTATTAAATCAAGCTTCAGCAAGTCCACTTTCTCAGGGTAGAAGGACTGAAAGACTACGTAATAAATCTGTATCTGGAGGTGTTACAGCAAATGCAAAACTTTCCCCCTCCGTCGCTGTCGACTGCCTGACATCTTCAAGCACCACCAAAAGCAATCCCCGATCAGCTACCATATCTTCGCCTTTCAGATTCAGAAGTGAAGAAAGAGCAGTAAAACGCAAAGAGTTCTTGCAGAGGATGGATGAAACTAAATCCAAAGAAGAAGAGAAAGTTCAGCTGCAAAGGACTCCCAAGAGGAAAACAGAGCATGATCATCACAAGAAGCTGAGGAAGAGCAGTGGCTCCACATCCAAACTAAATGAGGACATGCCTGGTGGATCACAATCACCAAGTAATCAGATTAGAAAGATTTCTCATGCACTGCCCCGGTCACCAAAACTTGTGAAAAAAGCAAGTTCTAGTACAGTCCATGACAAAAGCTTAGGAAATTCATGGAAGCCTCCAATGTGCACCAATAATTCCAAACGTACAACAGAAAAAGTTAACCGAACAAGAAGGCAATCAGTGATTTCATTATCAAATACCGCAACAGAAAATGCTTCTCCAAATATTCAGCATTGGAACATGAACTTGTGTTTTGAAGAATATGCTGTCAAAGAAACTGAAGCCACTTGA 1953 0.4112 MGESTTCLVRSFSTPSDTSCVVQEGNPMRMLGESISFGRFITEGLDWEKWSAFSHKRYVEEAEKYSKPGSVAAKKAYFEAHYKKKAAERAAALIQEANSQANGTFDSKTLEGNCTDISTEMNSKADNVVIVNEQEDKETVNCQVVECADMNQYKCDSGQSDLVISNVEGTEDVPHPHVDTNLNMECSALVDNSNQFHHVEVHNSNLVDHHTVDREENSSKLSTETMAAKRPHSLDEGKVAVGVSLSSEIHNGSKGKKSDGDLVEKKRPNARSLRMSINLPSGTGEKCNKVAALSQSRNGLNNFSTSKKSVGGSVDKKRITAPSLYMSNNLPSGTRVTSKTATSAVKPRNGTNFAARSMKSIGDSVEKRPTLRSLNTHYMSINLASGLGETSKTTSAIEQNRIKKIHSHLPKDNPLALRTSTKASRGLLNQASASPLSQGRRTERLRNKSVSGGVTANAKLSPSVAVDCLTSSSTTKSNPRSATISSPFRFRSEERAVKRKEFLQRMDETKSKEEEKVQLQRTPKRKTEHDHHKKLRKSSGSTSKLNEDMPGGSQSPSNQIRKISHALPRSPKLVKKASSSTVHDKSLGNSWKPPMCTNNSKRTTEKVNRTRRQSVISLSNTATENASPNIQHWNMNLCFEEYAVKETEAT* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2268 650 MobiDBLite consensus disorder prediction 213 271 - -
Apr10g2268 650 MobiDBLite consensus disorder prediction 542 564 - -
Apr10g2268 650 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 292 - -
Apr10g2268 650 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 300 632 - -
Apr10g2268 650 MobiDBLite consensus disorder prediction 574 603 - -
Apr10g2268 650 MobiDBLite consensus disorder prediction 252 271 - -
Apr10g2268 650 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 300 632 IPR044216 -
Apr10g2268 650 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 292 IPR044216 -
Apr10g2268 650 MobiDBLite consensus disorder prediction 503 610 - -
Apr10g2268 650 MobiDBLite consensus disorder prediction 503 525 - -
Apr10g2268 650 MobiDBLite consensus disorder prediction 423 440 - -
Apr10g2268 650 MobiDBLite consensus disorder prediction 423 456 - -
Apr10g2268 650 Pfam Targeting protein for Xklp2 (TPX2) domain 488 556 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2268 Apr-Chr10 34868929 34874038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2268 - - gmx:100799349 788.875