Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2263 ATGGCTTCGTATGATGAGCAACAAGGAAAGCCTCTACCCAAGTTTGGGGAATGGGATGTGAATGATCCTGCCTCAGCTGAAGGATTCACTGTTATATTCAACAAGGCGAGAGATGAGAAGAAAATTGCCTCAGCATCTGGACGATTCCCTTCACAGCGAAGGAATGATTCTCGCAACCGCAAGGGTAACAAAAAATTCAAGAGTTCCCCAAAGAAAAAATGGTTTTGCTTTGGCCCTTAG 240 0.4458 MASYDEQQGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIASASGRFPSQRRNDSRNRKGNKKFKSSPKKKWFCFGP* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2263 79 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 76 IPR040387 -
Apr10g2263 79 MobiDBLite consensus disorder prediction 41 71 - -
Apr10g2263 79 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Apr10g2263 79 PANTHER PROTEIN NOI4 6 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2263 Apr-Chr10 34833362 34834452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2263 - - gmx:102669045 137.117