Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2251 ATGGTTTCCGATGGCGTGGCGGCGGAGGAGCCGTTTCTGGCATCGGGTCGGAGCTCCGAGAAGCTGAGTCTTCCATCACTCCAATCGAAGATGAAGTGCGATCCGGAAGGCTACGAATCGGAGCTACTCCTTCTACGTAGCCAATTCAACTCTTCGCTCGAACTCTGTCAGAAACAAGCGGATTTGAACTTCACCTCCATCACCGGCATAGCCACCGATCCCACCGTCGCCAAAGACCTCGGCGACAGAGCCACGTTCCTCGCCCACGTCACTCCTTTCTACCCCAAACACCTCGCCGATTTCCCTCACAAACTCTCCGATTTGCTTCGCCGCGCTGCGCTCACGCTTCCTTCAGGCCTTCGTTGTCACCTCGCTCAGGCTCTTATCCTTCTCGTTAACCGAAAGATTGTTGACATTGGAGACACGCTGTCGTTGTTCATGGAGCTTCAAACCCTAGGTGACAGAACGCTGAAGAAGTTGGCGTTTGATCACGTTATTCACAGCATACGCCGCATGAACGAAAAGCATAAGAACGAAGTCAAGAACCGAGCGCTTCAGAATGTGTTGTTTGCCATGCTTCAGCAAGAGAAAGAAGAGGAGGCCAAGAGGGCGCTCGTGACTCTGTGTGAGCTTCACAGGAGAAAAGTGTGGTTTGACGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCAGCATCGAGGATTATGATAGCAGCTTTATCATTTCTGCTAGATTATGAGAAGATTGAAAATGATGATGATAGTGATGATTCAGAAAGTGATGATGAATTGGTTGGATCACCTCAAGTTGTCCTTAGCAAGGAGACAGTTTATAAGGCAAGCCACCAAGGTACAGCAGCTAGCAAAAAGAAAAAGAAAGCTAAGCTACAGCGTGCCATACGCAGCATGAAAAGAAAGCAACGCATGTCATCTGAAAGGACCAATAACAGTTATTATTCACCTCTTAACCATCTCAAAGATGCTCAGGGTTTTGTCGAGAAGCTGTTCTCTCGTCTTCAGAAATGTAATGAACGATTTGAGGTTAAGATGATGATGTTGAAATTGATTGCTCGAACAGTTGGACTTCACCAGTTAATATTGTTAAGCTTTTATCCTTTTCTTCAGAAATATATTCAGCCACATCAACGTGATGTTACAAATTTGCTTGCAGCAGTGGTTCAAGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTCAAACAAATAGTAAATCAATTTGTACATGACCGCTCACGCCCTGAGGCTATTACTGTTGGGCTAAATGCAATCCGGGAGATATGCATGCGCATGCCATTGTTAATGAATGAAGACTTACTGCAAGACCTTGCCCTATATAAGAAGTCACGTGAGAAGGCAGTTTCTGTAGCTGCTCGATCTCTTATTACATTATTCAGAGAGGTTTGCCCTTCACTGCTAGTTAAGAAGGACCGTGGGCGGCCTACTGACCCTAAGGCAAGACCAAAGGCCTATGGAGAGGTCAATGTTGCGACTGATGTTCCTGGTGCTGAGTTGTTGCAGATTATTGACAATGATGATGAGCAGGAGAGTGGTGATTCTGATGGTTTTGTATGCAGTGACTCTGACAATGACCAGGAAATTGATCATATGAGTATAAATGATGATGATGATGATAACCAGCTATGCAGTGACGATACTGGAAGCCATGATGATGATGTTGTATCAGAAGATGAAGATGCAAGAAGTTCTGATAACGAAACTGGTGTTAGTGATGCTGTTGAAGACAGTGAAGAGGAAGATGATGAAGAGGATGGTGACGTTTCAGAACATGAAGATGATGGTCTGCATTCTGGCAGTGATTGTGGAAGTGTGGAGACAAAAAGTACACTGAAAGACCCAGCAAAAAAGAGGAAGTTTACTGATTTTAATGGTCAACTTATAGCTGCTGATACAAGTCTCCGGGCTTTGAAGAAACTGGCAGGGGCAAAAGTGGGGGATGCCCTATCGGAATCTAAAGATGGAATTCTTTCTAATGAGGACTTCCAAAAAATCAAAGAACTAAAGGCAAAAAGAGAGGCAAAAAATGCATTGGCTCAGCATGGGCTAGCCAAGTCAGCATCAATTAAGGTTCCGAGCTCTGATCAACTAAGTTTAAAGCGTGTGGATGGTACCATGCTTGAAGTTCATGTAAGGAAAAGGCTGAGTAAGGATGAAAGGTTAGCATTGGTTAGAGCAGGCAGGGAGGAAAGAGGAAAATACCATGCTCGAACTGCTGTAAAACAGAAAAAGACTGGTGGCCTAAGCAACCGACAAAAGGAACACAAGAAGAAAATGCCCTTGGCTGCAAAGAGAGATAAGGTAGCAAGATCTCGAATAGAGAAAAAGAAGAAACATCAGCGATCCAGCAAACAGTTCCGTGGTAGGAAAGCGTGGAAGCAATAA 2436 0.4495 MVSDGVAAEEPFLASGRSSEKLSLPSLQSKMKCDPEGYESELLLLRSQFNSSLELCQKQADLNFTSITGIATDPTVAKDLGDRATFLAHVTPFYPKHLADFPHKLSDLLRRAALTLPSGLRCHLAQALILLVNRKIVDIGDTLSLFMELQTLGDRTLKKLAFDHVIHSIRRMNEKHKNEVKNRALQNVLFAMLQQEKEEEAKRALVTLCELHRRKVWFDERTANAICTASFHPASRIMIAALSFLLDYEKIENDDDSDDSESDDELVGSPQVVLSKETVYKASHQGTAASKKKKKAKLQRAIRSMKRKQRMSSERTNNSYYSPLNHLKDAQGFVEKLFSRLQKCNERFEVKMMMLKLIARTVGLHQLILLSFYPFLQKYIQPHQRDVTNLLAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGLNAIREICMRMPLLMNEDLLQDLALYKKSREKAVSVAARSLITLFREVCPSLLVKKDRGRPTDPKARPKAYGEVNVATDVPGAELLQIIDNDDEQESGDSDGFVCSDSDNDQEIDHMSINDDDDDNQLCSDDTGSHDDDVVSEDEDARSSDNETGVSDAVEDSEEEDDEEDGDVSEHEDDGLHSGSDCGSVETKSTLKDPAKKRKFTDFNGQLIAADTSLRALKKLAGAKVGDALSESKDGILSNEDFQKIKELKAKREAKNALAQHGLAKSASIKVPSSDQLSLKRVDGTMLEVHVRKRLSKDERLALVRAGREERGKYHARTAVKQKKTGGLSNRQKEHKKKMPLAAKRDKVARSRIEKKKKHQRSSKQFRGRKAWKQ* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2251 811 MobiDBLite consensus disorder prediction 560 583 - -
Apr10g2251 811 MobiDBLite consensus disorder prediction 787 811 - -
Apr10g2251 811 Pfam NUC130/3NT domain 86 137 IPR012977 -
Apr10g2251 811 MobiDBLite consensus disorder prediction 764 786 - -
Apr10g2251 811 MobiDBLite consensus disorder prediction 588 607 - -
Apr10g2251 811 Coils Coil 288 311 - -
Apr10g2251 811 MobiDBLite consensus disorder prediction 743 811 - -
Apr10g2251 811 Pfam SDA1 446 807 IPR007949 -
Apr10g2251 811 SUPERFAMILY ARM repeat 85 484 IPR016024 -
Apr10g2251 811 PANTHER HSDA/SDA1-RELATED 19 810 IPR027312 GO:0000055|GO:0042273
Apr10g2251 811 PANTHER PROTEIN SDA1 HOMOLOG 19 810 - -
Apr10g2251 811 MobiDBLite consensus disorder prediction 524 633 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2251 K14856 - gmx:100816774 1267.29