Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2250 ATGTCGGTGATGAGGTTTCAACTTCCCAGTAAGCATGTTTCAGCCGCCATTCACTCTAACTCTCTTCAGATCGTGTCAAAACCGAACATCGCGAGTGAGGAGTTTATGGAAAAGGTATTGAACAGAAGATGGAGTTTGATGAGCCCAGAAACCAAAATTCAGCAAATAACACACACGCATGGTTCTAATTTCCGATTGAACACTCATCCAGCTTTTGCTGATGGTAATCGCATGGTAGACATGAATAAACAAAGCAACTACTTCTATATCGTGCGAGATGATTTGTTGCACCCACTAATTAATGGCAACAAAGCAAGAAAACTCGATGCACTACTTCCTCTCATTCAACATAATTCCGTGACTGATGTGGTTACATGTGGAGGTTGTCAGAGTGCTCACACAGCTGCGATTGCTGTTCTGTGTGCTGAGAAAGGAATTGTGTCACATCTGCTTCTACGAGGGGAGCAACCTGAAATCTTGACTGGCTATAATTTGATGTCTACAATATATGGAAATGTCACATATGTTCCAAGAAATATTTATGCCAACAGGGAAGACATGCTAATGAACTATGCCAAGTCTGTGGCTGGTGACAATGGTTCTGTCCTTTGGTTTGGTGATATCATTCAGGCTTCTTCAACAAATGAATTGTCTACTTCAGATTTTATGCAAATGGATGTAAGTGGAAGTGAGGGAAACCATCTACGAAAGATTTTGGTTGTCAATGAAGGTGCAGGTGATTCTGTTGCTCTACTAGGCATTATTCGCTTGGTCCACTACTTATCACAAGATCATTTACTTGGAAAACAAAGGGCCATAAAGTTTGTTGTAGATGCTGGTACTGGTACAACAGCTGTTGGTTTAGGACTTGCAGCCCTTTATTTAGGACTCCCATGGGAGGTATATGCAGTCATGCTGGCTGAAAAAATTGATGGGTACAGAAAGCAAGAGGAGTGGTTAATTTCAGAATTCAAAAAGCATTTTAATATAGAGTTTATTGATCACAGTCACAATGTAAACAGAGAAGATGCTGGGATTGTGCGTTGGGTGGAACGTGGCCGTCCAAGAAAATTTGGTAATGTTTTGGAAGGGGAAGTGGAAGCATGTCAGCAAATTGCCCAACAAACTGGGATTCTGGTGGATCCTGTGTACACTTTAGCTGCTTGGGAAACAGCAATGCTTCTCTCTAGCAAAGAAGCTGAAGGAGGACCAGAAGTGGTGATGCTTCATACTGGAGGCACATTGGGTATGTTTGGGTTAGCACAGAGGTACAAAAAATATTTTGGCATGCTTAGAAAAGGACTCAACCATTATTAG 1317 0.4161 MSVMRFQLPSKHVSAAIHSNSLQIVSKPNIASEEFMEKVLNRRWSLMSPETKIQQITHTHGSNFRLNTHPAFADGNRMVDMNKQSNYFYIVRDDLLHPLINGNKARKLDALLPLIQHNSVTDVVTCGGCQSAHTAAIAVLCAEKGIVSHLLLRGEQPEILTGYNLMSTIYGNVTYVPRNIYANREDMLMNYAKSVAGDNGSVLWFGDIIQASSTNELSTSDFMQMDVSGSEGNHLRKILVVNEGAGDSVALLGIIRLVHYLSQDHLLGKQRAIKFVVDAGTGTTAVGLGLAALYLGLPWEVYAVMLAEKIDGYRKQEEWLISEFKKHFNIEFIDHSHNVNREDAGIVRWVERGRPRKFGNVLEGEVEACQQIAQQTGILVDPVYTLAAWETAMLLSSKEAEGGPEVVMLHTGGTLGMFGLAQRYKKYFGMLRKGLNHY* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2250 438 PANTHER D-CYSTEINE DESULFHYDRASE 2, MITOCHONDRIAL 13 433 - -
Apr10g2250 438 Gene3D - 103 203 IPR036052 -
Apr10g2250 438 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 13 433 IPR027278 -
Apr10g2250 438 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 86 425 IPR036052 -
Apr10g2250 438 Gene3D - 87 102 IPR036052 -
Apr10g2250 438 Gene3D - 225 427 IPR036052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2250 K05396 - gmx:100801680 677.552