Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2247 ATGCTAGATGATATTCTTATAAAGCAGCTCCTCCTAACACACGATCCAGATGGTCGCAGGCTGGATTCTGAGACAATGCTCCATGCTGTCGGCAACATTATGTTTCATGCTTCCACAATAGTGGTGGCTTCTAATTTGTATTCTGCTTGCTTTCAGAAGAATGATATAAGTGAAATTGAAACGCTTGGTTCTTGTGAACCAATTGGATACATCATTACAAAAATACGCAAGATACTCTGCAAATGCTGTCGAGAAGGTGATACCAACCCAAAGATCATGAGTTTGTTTGATTTGATAGGGAAGTATAGCTGGGATGCAAAAGTAGTTTTAGTACTTGCTGCTTTTGCTGCAAAATATGGTGAATTTTGGCAACTTATGGAGCTATATCCTGGTAATACTTTGGCGGTTTTAATTTCAAGAGTTAAGTTGATGCCCTGCAACTTAAGGCCTCTGCAGCTACAAATCAAGGCATTGAGCTTGTTGGTTAAGACTATGATGGATGTGGCAATGTGTATCATTAAGTTTGAATCCCTCCCCTTTCAACATGTTGGGCAGGGGAATGACATATTCCATGTCACAAAGTCTCTAATATACGAAGCTGTATACTGGATCACTAGAAGCTGTTTGGCATGTTTTTCTCAAGTCATGGATTTCACAACCAAGAAATATGATCAAGTGTATTCAGATTCATCAATAATTGCTGCCTGGGAGCTCTCAAGTTTGGCGTATAAGTTAAGTGACATATGCAGCATTCTGAGAGGACAGGTGGATCTGTGTCAAGAGGAAATAGAAAGAAACTTGTATGACAGGCTGTTGAATCTTGATTGCGAGGATCACATTGATAATCAGAAGGTTCTCACTTTATTTTTTCCCTCCAAGAATTACTTGCCATTGAAGGATTGCTCAAGACAAGTAAAGCTTGGTCTGTCTGAATTGAAAAATAAGGAAGTGCTATTCTTTATTTCAAAGCCACATCTACACACCATGGAAGAAATATTCTTAATGGTTCAGCAAACAAGTGATCATCCTCTAAATGAGAGGTTGAGGGAAAGTTATAAGATTGTGTGGGTTCCCCTTCCATCTTCTGATACATGGACTGATGCTGAAGAGAATAGTTTTAATTTTCTGTCAGATTTCTTGCCTTGGTATGCTGTTAGAAGACCAGGGGAACTTAGCTCAGCAGTGGTGCGGTACATAAGGGAACAATGGAACTATAAGGATGAACCCATCATGGTAGCTCTGGATTCAAATGGGAAGGTCACAAATTACAATGCTCTTGATATGATCAAGATTTGGGGAGGTTTATCTTATCCCTTTTCGGCTTCAAAAGAGGTAGAACTCTGGCAAGACCAGAATTTGACAATGCAACTTTTGCTGGATGGTGTCAATCCTCTCCTTGCATACTGGGTTGAACAAGGCAAAAATATTTGCCTTTATGGGAGTGTAAACATGGTTTGGATCCAACAATTCAATGATAAGATAACTGAGCTCAAACTAGCAGGTCTGCAGCTGGAAACAATATACGTTGGTAATAGTCTCAGTCAGTTAGGTGAAGATGTTAAAATTGTTAAAAATATAATGGCAGGTAGCGGTGAAATAAATCTCAGTGATCCACTTTCCTTCACAAATGTACAATTATTTTGGCTTCGGTTGGAGAGTATGAGAAGATCTAAACTGAGATTAGGAAGGACACCAAGTTCTGATCAAATACTAGAAGAGTTGTCAGTTTTGCTTGACATGACTGATAGAGAAGAAAATTGGGCAGTAATTGGAAGTGGAAGTTCAAATGATGTTTTTAGGCTTCAAGGGGTGCAAGTGATGGAATTCTTAAGGAACTGTTCTGAGTGGGGAGAATTGTCGGGTGCACAAAGAAACTTCCTAGATCCTACTTTTCTAGCAGGGAGTTGCACTCACTCTTACTTGGTTCCATCAAGAGAAAATGAAAGACCAAGTCAAGGAACTGTGATTTGTCAAGTGTGCAAGCGTCCCATGAAGAAGTTTGTAGTGTACCAGCCATGA 2019 0.3962 MLDDILIKQLLLTHDPDGRRLDSETMLHAVGNIMFHASTIVVASNLYSACFQKNDISEIETLGSCEPIGYIITKIRKILCKCCREGDTNPKIMSLFDLIGKYSWDAKVVLVLAAFAAKYGEFWQLMELYPGNTLAVLISRVKLMPCNLRPLQLQIKALSLLVKTMMDVAMCIIKFESLPFQHVGQGNDIFHVTKSLIYEAVYWITRSCLACFSQVMDFTTKKYDQVYSDSSIIAAWELSSLAYKLSDICSILRGQVDLCQEEIERNLYDRLLNLDCEDHIDNQKVLTLFFPSKNYLPLKDCSRQVKLGLSELKNKEVLFFISKPHLHTMEEIFLMVQQTSDHPLNERLRESYKIVWVPLPSSDTWTDAEENSFNFLSDFLPWYAVRRPGELSSAVVRYIREQWNYKDEPIMVALDSNGKVTNYNALDMIKIWGGLSYPFSASKEVELWQDQNLTMQLLLDGVNPLLAYWVEQGKNICLYGSVNMVWIQQFNDKITELKLAGLQLETIYVGNSLSQLGEDVKIVKNIMAGSGEINLSDPLSFTNVQLFWLRLESMRRSKLRLGRTPSSDQILEELSVLLDMTDREENWAVIGSGSSNDVFRLQGVQVMEFLRNCSEWGELSGAQRNFLDPTFLAGSCTHSYLVPSRENERPSQGTVICQVCKRPMKKFVVYQP* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2247 672 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 3 671 IPR039299 GO:0010088
Apr10g2247 672 Pfam Sieve element occlusion N-terminus 3 274 IPR027942 -
Apr10g2247 672 Pfam Sieve element occlusion C-terminus 442 671 IPR027944 -
Apr10g2247 672 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 3 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2247 Apr-Chr10 34731101 34734781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2247 - - gmx:100819823 1038.87