Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2241 ATGGCGGAGCTCCGTCACTCCTCCTCACTCGGCAGCCGAGCGTCGTCTTCTCCGATGAAGAGAGACGGCGTCGGCGATTCCTCGCCTCTCATTTCTGACAATCACCACGCCGACGACGAGCACGATCGCCACTCTTCTAAGGAACGCGACCGTCATCTATGCTCCTTCTTCACCGACGACCCTAGGGCTTCTCCTCACAACTCCAGGATCTCTCTCGTTTTCACCTTGCTTCTTCTCCTCGTTGGTTTATTTTCCGTATTCACAATCCTCCATAAACTCAATGCGCCTTACTTGTGTAAAAAAGACGGGATTGTTCTTCATTGCCCACACGTTAAAGAATCACCATCTCTTTGGGAAAATCCTTTCTCATCCACGACATCTTGGAAGCCCTGTGCTGAGCGCCGGGATGGTGTAATATCAGAACTTCCTCCTGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTGGCAAAAATAATGAATGCCACTCTTATTTTGCCTGTATTGAAGCAGGATCAGATTTGGAAAGATCAAACGAAATTTGAAGATATTTTTGATGTGGATCACTTCATTGACTACCTGAAGTATGATGTTCGTATTGTGCGTGATATCCCAGAATGGTTTACTGATAAAACAGAGCTATTTTCTAGTATAAGACGGACTGTAAAAAACATTCCAAAATATGCACCTGCACAATTTTACATCGACAACGTTCTGCCCAGAATCAAGGAGAAGAAAATTATGGCTCTGAAACCTTTTGTTGATAGGCTGGGATATGATAATGTTCCTCCGGAAATCAACAAATTGAGGTGTAGAGTTAATTATCATGCTCTGAAATTTCTTCCTGATATAGAGCAGATGGCTGATCTGCTAGCTTCAAGGATGAGAAACCGAACAGGCAGTTCAAATCCTTATATATTCGAGAAAGGAATGGTGGGCCTATCATTCTGTGATTTTGTGGGGACTAGAGATGAGAAAGCTAAAATGGCAGAGTACAGAAAAAAGGAATGGCCTCGACGGTACAAGAATGGCTCCCACCTGTGGCAGTTGGCTCTGCAGAAGCGTAAGGAAGGACGATGTCCTCTGGAACCTGGAGAAGTGGCAGTAATTCTTCGGGCTATGGGCTATCCAAAGGAAACACAAATTTATGTAGCTTCTGGACAAGTGTATGGTGGACAGAACAGGATGGCTCCACTGAGAAATATGTTCCCTAATCTGGTTACGAAGGAGGAGTTGGCAACTAAAGAGGAGTTAGATGGTTTCAGAAAGCATGTGACGAGCCTAGCAGCTCTTGATTTCTTGGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGCTAATCATTGGGGCCCGTAGATACATGGGTCACCGTCTAAAATCAATTAAACCTGACAAAGGACTGATGTCCAAGTCTTTTGGTGACCCATACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTCACTCACCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTACGATCTCTGGGAGAACCCTCTTACTCCTTGTATGTGTAGAGCCTGA 1629 0.4469 MAELRHSSSLGSRASSSPMKRDGVGDSSPLISDNHHADDEHDRHSSKERDRHLCSFFTDDPRASPHNSRISLVFTLLLLLVGLFSVFTILHKLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWKPCAERRDGVISELPPENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYIFEKGMVGLSFCDFVGTRDEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2241 542 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 542 - -
Apr10g2241 542 Pfam GDP-fucose protein O-fucosyltransferase 151 478 IPR019378 -
Apr10g2241 542 MobiDBLite consensus disorder prediction 1 46 - -
Apr10g2241 542 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 542 - -
Apr10g2241 542 CDD O-FucT_plant 151 481 IPR024709 -
Apr10g2241 542 PIRSF UCP009360 31 542 IPR024709 -
Apr10g2241 542 Gene3D - 347 485 - -
Apr10g2241 542 MobiDBLite consensus disorder prediction 32 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2241 Apr-Chr10 34690547 34696003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2241 117 541 Miscellaneous Gene Families AT1G22460 35.307 5.57e-89 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2241 - - gmx:100809112 1045.42