Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2233 ATGTGGTGTATGATGGGTGATTCCGGTGGCCATTACTGTCCTAAGAAGACCGATGATTTGTGCGGTGATGTTTGTGGCCAGGAGTCGAGTCAAGCATCGGGCATGTCAAGAGTACGCTGCATGTTACGTGGGTTGGATGTAAAAACTTGTATATTTCTCTTTGCTGTTGTCCCAATGTGCATCTTTGGAATCTACTTACATGGACAGAAAATCTCCTACTTCCTCCGGCCGCTATGGGAAAAACCACCCAAGCCGTTCCATGTCATCCCACATTACTATAACGAAAATGTTTCGATGGAGAATATCTGCAGACTTCATGGCTGGGGAATCCGTGAATACCCGAGACGTGTATATGATGCTGTGCTGTTCAGTAATGAATTGGAAATACTTAACTTGCGCTGGAGAGAATTGTATCCCTACATAACACAGTTTGTGCTCCTCGAGTCAAATTCCACATTCACTGGTAGGCCTAAACCTCTGGTTTTCAAGGGCAACCGGGAGCAGTTCAGATTTGTGGAGTCCCGGTTAACATATGGAACCATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTATTGAAGAGGCGTATCAAAGAGTGGCATTGGACCAACTCCTGAAGATAGCTGGTATTACAGATGATGACTTGTTGATTATGTCTGATGTTGATGAGATTCCAAGTGCTCACACAATTAACCTATTGAGGTGGTGTGATGACATACCTTCGATCCTTCATCTTCAGCTGAAGAACTATCTTTATTCTTTCGAGTTTCTCGTGGATGATAACAGCTGGAGAGCTTCCATTCACAGGTATCAGAGTGGTAAGACAAGGTATGCGCATTACCGCCAGTCTGATGAGTTGTTGGCAGATGCTGGTTGGCATTGTAGCTTTTGCTTTCGCCATATCAGTGATTTTGTCTTTAAGATGAAAGCCTACAGCCATAATGACAGAGTTAGATTCTCTCATTATTTAAATCCCAAGAGAATTCAAGATGTTATCTGCAAAGGGGCTGATTTATTTGATATGCTACCAGAGGAATACACCTTCAAGGAAATCATTGGTAAAATGGGACCAATACCCCATTCCTATTCTGCAGTTCACCTTCCTGCTTATCTACTGGAAAATGCACACAAATATAAATTTCTATTGCCTGGAAATTGCTTGAGAGAGACCAGATGA 1179 0.4266 MWCMMGDSGGHYCPKKTDDLCGDVCGQESSQASGMSRVRCMLRGLDVKTCIFLFAVVPMCIFGIYLHGQKISYFLRPLWEKPPKPFHVIPHYYNENVSMENICRLHGWGIREYPRRVYDAVLFSNELEILNLRWRELYPYITQFVLLESNSTFTGRPKPLVFKGNREQFRFVESRLTYGTIGGRFKKGENPFIEEAYQRVALDQLLKIAGITDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLKNYLYSFEFLVDDNSWRASIHRYQSGKTRYAHYRQSDELLADAGWHCSFCFRHISDFVFKMKAYSHNDRVRFSHYLNPKRIQDVICKGADLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAYLLENAHKYKFLLPGNCLRETR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2233 392 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
Apr10g2233 392 PANTHER BETA-1,4-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 391 - -
Apr10g2233 392 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 1 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2233 Apr-Chr10 34658353 34661272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2233 1 391 Glycosyltransferase AT1G12990 79.795 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2233 K00737 - gmx:100816069 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1266 8 17733957 17736818 Apr10g2233 10 34658353 34661272 PCT