Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2232 ATGACGAAACTGAAAGAGCTAATAGGGATAATGAAGGACAAAGCTTCACAAGGCAAAGCTGCGATTCTTTCTAAACGAATAACACTCTATCTCCTTCGTGCCACCAGCCACGACTCTTTCACCCCTCCAACCCATAAACACATCTCCACGCTCCTTTCCTTTGGTGACGGTTCACGCGCCACTGCTTCCGCCGCCGTGGAGCTTCTCATGAACCGGCTTCAGACCACCCAGAATTCTGCCGTGGCCCTCAAGTGTCTCATCGCCGTCCACCACATCATAAAGCATGGTACCTTCATCCTAAAGGACCAACTTTCCGTGTTCCCCTCCAGTGGTGGCAGAAACTACCTTAACCTCTCCAATTTCCGCGACAAAAGCACTCCAATCTCGTGGGAACTCTCTTCCTGGGTACGATGTTACGCTAAACACGTGGAACAGCTTCTCTGCACGAGCAGAATCCTCGGATTTTTCCTCAGCGGAGAAACAAACGATGCTCCGGAAACGCGAGAAGAGAGAGCTTCGGGTCTTACCAACGGTGATTTATTGAGAGAGACGGAAGCGTTGTTGGTGTTGATTGAAGGAGTTGGGGAAATACCCGAATCTGGTTCCGTTGAGGAGAACAAATTGGTGGGTGAGATTGTGGGTTTGGTGGAAGAAGATGGGGTTGCGGCGTTGAGTGAGGTGTGTGTGAGAGTGAACGAGTTCAGGGAGAGATTGGGGTGCCTCTGTTTTGGGGAAGTTGTGGAATTGGTTTACGCGATGAAGAGATTGGAAGGGTGTAAGGAGAAGATTGCGATGATGAAGGTGATGGTTGAGGTTGCAGAGAAAATGAGAATGTGGGATTCAGTGAGAGAATTGAAGGAGAAGGTTGAGAACATGGAAGAAGGGAAACTTTACAGAAGAAAGGTCACAAGACACGTGTCAGATCGTTTTGCTGTTGCGGTTCTTAGTTCTGTTGATTTGGTCCAGTTTCGTTCTACAAGGTTCTGGTTTGAAAGTGATGATTTGTAA 1008 0.4831 MTKLKELIGIMKDKASQGKAAILSKRITLYLLRATSHDSFTPPTHKHISTLLSFGDGSRATASAAVELLMNRLQTTQNSAVALKCLIAVHHIIKHGTFILKDQLSVFPSSGGRNYLNLSNFRDKSTPISWELSSWVRCYAKHVEQLLCTSRILGFFLSGETNDAPETREERASGLTNGDLLRETEALLVLIEGVGEIPESGSVEENKLVGEIVGLVEEDGVAALSEVCVRVNEFRERLGCLCFGEVVELVYAMKRLEGCKEKIAMMKVMVEVAEKMRMWDSVRELKEKVENMEEGKLYRRKVTRHVSDRFAVAVLSSVDLVQFRSTRFWFESDDL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2232 335 Gene3D - 3 155 IPR008942 -
Apr10g2232 335 ProSiteProfiles ENTH domain profile. 19 157 IPR013809 -
Apr10g2232 335 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 328 - -
Apr10g2232 335 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 328 IPR045192 GO:0048268|GO:0072583
Apr10g2232 335 SUPERFAMILY ENTH/VHS domain 28 155 IPR008942 -
Apr10g2232 335 CDD ANTH_N_AP180_plant 27 150 - -
Apr10g2232 335 Pfam ANTH domain 33 191 IPR011417 GO:0005543
Apr10g2232 335 SMART enth_2 25 157 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2232 Apr-Chr10 34651770 34653214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2232 - K20043 gmx:100808393 405.986