Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2204 ATGGGAAAGAAGCAATCTTTGCGTAGCAAAGCCACCCACCTTGTATCTGTCCTTCTCAACCCCATCTCTGATTCCGACGCCAACAGTAATAAACCCTCCAAACACCCTCTACCGACACCACCACCTCCTAACGGAGAAGTAGGTGAATCAGAAATAACTGATGAAGAGGGTAGCCACGATTTAGTTGATGGGCCTGACACTTCATCCTTCACTGCGTTCCTCTATTCTTTTTTGTCTTCCTCTGACACTGGAGATAATGCAAACGCTCATGGGCATAATTATGATAAAGCTGCACCTGATAACAACCCTTTACCAGACTCATCCCTGAAGGAAAATGGTGGGAAGAAAAGTTTGCTTTCTAGGAGCAAGCAATCGGTTGGTAGAGCCATTCGCCAAGCTGCGAGAATGGGTGGATTTCGCCATCAAGATCGCAAGGATAATCTTCAAATGAAATTTGATGATGGAAATGGTGTTGAGATGAGGCCTATTGAACCTGTTCAAGAGACTGTGCCTGTTCCTTTGGTTGATCTGCCGGAAATTTCTGAACCCTCAGCTCTCCTCTCTGACAGTATAAGAAATGTTCTCTACGCTTCTCTTCCATCACTTATGCACGGAAGGAAATGGCTGTTGCTATACAGCACTTGGAGGCATGGTATATCACTTTCAACTCTGTACCGAAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTTGGAGACCGAAAAGGGGCAGTATTTGGTGGCTTGGTTGAAGCACCTCTCAGATCATCCAATAAGAAAAAATACCAGGGAACAAACAATTCATATGTTTTCACAAATACCTCTGGTCATCCTGTTATATATCGTCCAACAGGAGTAAACCGCTATTTCACACTCTGCAACACTGATTACTTAGCAATTGGTGGGGGAGGTCATTTTGCTCTTTATTTGGATGGTGATCTATTGAATGGCTCAAGTTCGGTCTCAGAAACTTATGGTAATCCTTGCCTTGCAAATTCTGAAGACTTTGAAGTGAAGGAAGTAGAGTTGTGGGGCTTTGTATATGCTTCAAAGTATGAGGAAATACTGGCATTAAGCAGAACAGAAGAACCCGGGATCTGCCGTTGGTAA 1113 0.4403 MGKKQSLRSKATHLVSVLLNPISDSDANSNKPSKHPLPTPPPPNGEVGESEITDEEGSHDLVDGPDTSSFTAFLYSFLSSSDTGDNANAHGHNYDKAAPDNNPLPDSSLKENGGKKSLLSRSKQSVGRAIRQAARMGGFRHQDRKDNLQMKFDDGNGVEMRPIEPVQETVPVPLVDLPEISEPSALLSDSIRNVLYASLPSLMHGRKWLLLYSTWRHGISLSTLYRRSMLWPGLSLLVVGDRKGAVFGGLVEAPLRSSNKKKYQGTNNSYVFTNTSGHPVIYRPTGVNRYFTLCNTDYLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSEDFEVKEVELWGFVYASKYEEILALSRTEEPGICRW* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2204 370 MobiDBLite consensus disorder prediction 18 65 - -
Apr10g2204 370 MobiDBLite consensus disorder prediction 18 33 - -
Apr10g2204 370 SMART 109ultra 184 348 IPR006571 -
Apr10g2204 370 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 364 - -
Apr10g2204 370 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 364 - -
Apr10g2204 370 Pfam TLD 210 347 IPR006571 -
Apr10g2204 370 MobiDBLite consensus disorder prediction 105 127 - -
Apr10g2204 370 MobiDBLite consensus disorder prediction 86 127 - -
Apr10g2204 370 ProSiteProfiles TLDc domain profile. 185 348 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2204 Apr-Chr10 34484179 34487172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2204 207 355 EF-hand Containing Proteins AT5G06260 30.189 7.91e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2204 - - gmx:100804124 583.178