Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr10g2197 | ATGGCAACAACAACGAGGTTCCTTCTTCTCCTCTTTCTGCTATCGCTAAGCTTCGCCGGAACCGTTAGATCTGAAGATTGTGTGTACACGGTGTATATTCGGACCGGGTCGATCATAAAGGGAGGAACCGATTCGGTTATTGGGCTTAAGTTATACGACGCCTACGGCTACTACATATACATCACCAACTTGGAGGCATGGGGCGGGTTAATGGATCCGGGTTATAACTATTTCGAGCGGGGCAATCTCGACATTTTCAGTGGCAGGGGTCCTTGCTTGGACGGACCCGTTTGCGCTGTGAACTTAACTTCGGACGGGTCGGGGCCCCATCACGGGTGGTACTGTAATTACGTGGAGGTTACTTCCACTGGGGTGCACATACCCTGCGCTCAGCAGCAGTTCACGGTGGAGCAGTGGCTCGCTACCGACACGTCACCCTATGAGCTATGGGCTGTAAGGAACTATTGCAACTACAACTTGGGCCAGGCCCATCCTAAGCCTAAGACCAGTGATGCTATCAGATTTGGATCTGGGCCTAGGGCTGGTTTCTCTGTTTTGGGCTCCACGGCCCGTGAGTAG | 579 | 0.5285 | MATTTRFLLLLFLLSLSFAGTVRSEDCVYTVYIRTGSIIKGGTDSVIGLKLYDAYGYYIYITNLEAWGGLMDPGYNYFERGNLDIFSGRGPCLDGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHIPCAQQQFTVEQWLATDTSPYELWAVRNYCNYNLGQAHPKPKTSDAIRFGSGPRAGFSVLGSTARE* | 193 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr10g2197 | 192 | CDD | PLAT_plant_stress | 27 | 154 | - | - | |
| Apr10g2197 | 192 | PANTHER | - | 1 | 185 | - | - | |
| Apr10g2197 | 192 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 28 | 145 | IPR036392 | GO:0005515 | |
| Apr10g2197 | 192 | Pfam | PLAT/LH2 domain | 29 | 147 | IPR001024 | GO:0005515 | |
| Apr10g2197 | 192 | ProSiteProfiles | PLAT domain profile. | 27 | 154 | IPR001024 | GO:0005515 | |
| Apr10g2197 | 192 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 185 | - | - | |
| Apr10g2197 | 192 | Gene3D | PLAT/LH2 domain | 19 | 146 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr10g2197 | Apr-Chr10 | 34425011 | 34425797 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr10g2197 | - | - | adu:107469134 | 298.516 |