Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2187 ATGGCCAACACACTACATAACGCCGCCATCTCTAGAATCACGTTTGGAGATTGTTCCATTTCTCGTTGTGTTTTTCCATCATTTTCCACTCTTCCTCTCAGAGCCATGCAAAACGGAAAACACGTAGAGCTTAGCAAAACGTTTGGGGTAGTAAAGGCAAAGTCAAATGGTGATTTGGAAATTTCTTTGAGCCCAAGGGTTGATGCAGTTAAATCTTCCAAAACTGTAGCCATAAGTGACCATGCCACTGCTCTTTTACAAGCCGGTGTTCCTGTTATTCGTTTAGCTGCTGGAGAACCTGATTTTGACACACCCGCTGTTATATCTGAGGCTGGGATGAATGCAATTGGTGAAGGGTACACGAGATACACCCCTAATGCTGGAACATTAGAACTGCGCCAAGCAATTTGTCATAAGCTACAGGAGGAGAATGGAATTGCATATACTCCTGACCAGATTTTGGTCAGTAATGGAGCCAAGCAAAGTGTTGTTCAAGCAGTGCTGGCAGTTTGTTCCCCAGGAGATGAGGTCATTATTCCCTCACCATTCTATGTGAGTTACCCAGAAATGGTTAGATTGGCTGATGCAACACCTGTGATTCTTCCAACCCACATATCTAATAATTTTCTTATGGATCCCAAACTGCTTGAAGCCAGCCTCACTGAAAAATCGAGACTACTTATTCTTTGTTCACCATCTAATCCAACAGGATCGGTGTACCCTAAGAAATTACTTGAAGAGATAGCCCAAATTGTAGCAAAGCACCCCAGGCTTCTGGTTCTCTCTGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCATGCAAGCTTTGCTTCTTTACCTGGAATGTGGAACAGAACTCTAACTGTAAATGGTTTTTCTAAGACATTTGCAATGACTGGTTGGCGGCTTGGGTATGTTGCTGGTCCAAAAAATTTTGTTGCAGCATGCGGAAAGATTCAAAGTCAATTAACTTCTGGGGCATGTAGTATATCTCAGAAAGCTGGTGTTGCTGCATTAGGACTAGGCTATGCAGGTGGAGAAACTGTTTCTAACATGGTGAAAGCGTTCAGGGAAAGAAGGGATTTCTTGGTTAAAAGCTTTAGAAAAATGGATGGTGTGAAGATATCAGAACCACAGGGGGCATTTTATCTATTCATTGATTTCAGCTCTTATTATGGAAGAGAAGCTGAAGGGTTTGGTGTAATAGAGAATTCAGACTCCCTCTGTAGATACCTACTAGACAAGGGCCTGGTTGCCCTGGTGCCAGGGAGTGCATTTGGAGATGATTCTTGCATCCGTATTTCTTATGCAGAATCCCTTACTATCATAGAGGAAGCCGTAGAGAGAATTAAAAAAGCACTTATCCCTCTAAGCTCTGCAACACTTGTTTAA 1401 0.4233 MANTLHNAAISRITFGDCSISRCVFPSFSTLPLRAMQNGKHVELSKTFGVVKAKSNGDLEISLSPRVDAVKSSKTVAISDHATALLQAGVPVIRLAAGEPDFDTPAVISEAGMNAIGEGYTRYTPNAGTLELRQAICHKLQEENGIAYTPDQILVSNGAKQSVVQAVLAVCSPGDEVIIPSPFYVSYPEMVRLADATPVILPTHISNNFLMDPKLLEASLTEKSRLLILCSPSNPTGSVYPKKLLEEIAQIVAKHPRLLVLSDEIYEHIIYAPATHASFASLPGMWNRTLTVNGFSKTFAMTGWRLGYVAGPKNFVAACGKIQSQLTSGACSISQKAGVAALGLGYAGGETVSNMVKAFRERRDFLVKSFRKMDGVKISEPQGAFYLFIDFSSYYGREAEGFGVIENSDSLCRYLLDKGLVALVPGSAFGDDSCIRISYAESLTIIEEAVERIKKALIPLSSATLV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2187 466 Gene3D Aspartate Aminotransferase, domain 1 76 451 IPR015422 GO:0003824
Apr10g2187 466 SUPERFAMILY PLP-dependent transferases 63 457 IPR015424 -
Apr10g2187 466 Gene3D - 122 344 IPR015421 GO:0003824
Apr10g2187 466 CDD AAT_like 93 455 - -
Apr10g2187 466 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 36 461 - -
Apr10g2187 466 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 36 461 - -
Apr10g2187 466 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 294 307 IPR004838 GO:0003824|GO:0009058|GO:0030170
Apr10g2187 466 Pfam Aminotransferase class I and II 91 453 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2187 Apr-Chr10 34330694 34333614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2187 K15849 - gmx:100780254 768.844