Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2186 ATGGAGTCGGAATCTCCGAGATCCGAATCTGAAACGCACCCGCTCTCGAACGAAATGGATGACCTCTGCCACGACATGAGTTCCCTCCAAGACCTAGCGAACCGCGGTGCGTGGCGTTCAATCATCGACAAAGTCTCACGCGCCAGAGCCCTCTCTCTCCTCCAAAAGCCCCACGACCACCTCACCTACCTCGCCTTCAACGCCCTCGCTTTCACCAAACTGCGTCGTTTCAACGAAGCTTCTGCGGAACTTGATTCGCTCGAAGACCTCGATAGCTCTCACTACAGATACGAAACCTACCCGAAAATTTACCCTAATCGGGTCGGATCCATGGTCCCTTTTTCCCTCCGATGGCTCCATTCCCTAATTCCCATAAAATTGGGTCAACGACAGCAAGGGATCGATCGATTGTACATTCTCCTCGATTTTGTGCGCGAGAAGATGAAGGAGAAGGAGAAGAACAACCTTGGTGTTTCTCTTGGTGTGTGGAGAAAACGAGAGGTTTTTGTTATGAATTGTATAATTGGGCACCATTTGAGTCAAAAAGAGTTTGGTGTTTGTTTGAGTTTGATGAAGGAGCTTCTTTCTCGTGATTCTTCGGATCCTTTGTTGGTTTCGCAACTTGGGTATATGCAATTACAAATTGGTGACTTGGAGGGTGCGAAAGTTTCGTTTTTGAAAGTGGAGAATGAGGGGAAGAATAATGGGTCGTTGAGTGAGGTAGAGTTGAAGAACCTTGTGAATAGGAATAAGGCGTTGGTATATTTGGTTGGGAAGGATTATGTGTCTGCGGTGAGGGAGTATGAGGAGTGCATTGAGAGAGACCAAACGGATATAGTGGCTGTTAACAACAAGGCTCTTTGTTTGATGTATCTTAGGGACTTGTCTGATTCTATAAAGGTGTTGGAGAATGCCCTTGAAAGGGTTCCTACTGTGGCTCTCAATGAGACCCTTGTTGTCAATTTGTGTAGTATGTACGAATTGGCATATGTAAATCACTCTGATATTAAGAGAACGCTTAGTAGTTGGATTGCTCGTGTTGCCCCTGATGACTTTGATGCATCCTGTACTCGTACATGA 1080 0.4611 MESESPRSESETHPLSNEMDDLCHDMSSLQDLANRGAWRSIIDKVSRARALSLLQKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRVGSMVPFSLRWLHSLIPIKLGQRQQGIDRLYILLDFVREKMKEKEKNNLGVSLGVWRKREVFVMNCIIGHHLSQKEFGVCLSLMKELLSRDSSDPLLVSQLGYMQLQIGDLEGAKVSFLKVENEGKNNGSLSEVELKNLVNRNKALVYLVGKDYVSAVREYEECIERDQTDIVAVNNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDASCTRT* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2186 359 Gene3D Tetratricopeptide repeat domain 170 340 IPR011990 GO:0005515
Apr10g2186 359 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g2186 359 Coils Coil 134 154 - -
Apr10g2186 359 SUPERFAMILY TPR-like 191 314 IPR011990 GO:0005515
Apr10g2186 359 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 8 358 - -
Apr10g2186 359 SMART tpr_5 245 278 IPR019734 GO:0005515
Apr10g2186 359 SMART tpr_5 202 235 IPR019734 GO:0005515
Apr10g2186 359 SMART tpr_5 279 312 IPR019734 GO:0005515
Apr10g2186 359 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 8 358 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2186 K20309 - gmx:100779691 648.662