Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2184 ATGCTGTTGCTGTTCCTTTTGTTGTTCTTGTTTGAGCCAACGGCTCACTCAATGCCTTTTCCGATCACATTTTCTGCGAGGCTCATTCATCGCTTCTCCGAACAAATGAAACCGGTCGGGCTTCCCACCGGTTCGTGGCCGGACCGGCGGAGCATGCCCTACTACCAGATGCTTCTCAGTAGTGACATTCTCAGGCGCAAGGTCAACAATGGAGGCGCTCGCTACCAGCTCCTGTTCCCTTCTCATGGCAGCAAAACGATGTCGCTCGGCAACGACTTTGGCTGGTTGCATTACACGTGGATTGATATAGGGACACCGAGTACTTCGTTTTTGGTAGCGTTGGATGCAGGGAGCGATCTCCTTTGGCTTCCCTGTGATTGCATACAGTGTGCTCCGTTGTCGTCGAGTTACTATTCCAATCTGGATAGAGATCTGAATGAGTATAGTCCATCTCGTTCGTTATCCAGTAAGCATCTATCTTGCGGTCATCGGTTGTGTGATATGGGTTCAAATTGTAAAAGTTCTGAGCAGCAGTGTCCATACATGGTCAGTTACTTATCAGAGAATACATCGAGTTCTGGATTGTTAGTTGAGGACATACTGCATCTTCAGTCTGGTGGCGGTGTAGCAAACTCCTCTGTTCAGGCTTCAGTAGTTCTTGGGTGTGGCATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGTCTAATAGGTTTGGGGCCCGGGGAGAGTTCAGTTCCAAGCCTTCTTGCTAAATCAGGATTAATTCATGATTCTTTTTCCTTGTGCTTTGACGAAGATGATTCTGGTAGAATTTTTTTTGGGGACCAGGGACCAACCACTCAACAGTCTACTTCATTCTTGCCTTTGGATGGAATATATTCAACCTATGTTATTGGAGTGGAGACATGTTGTATTGGGAATTCTTGCCTTAAAATGACAAGTTTTAAAGCACAGGTTGATAGCGGGACATCATTTACATTTCTTCCTGGCCATGCGTATGGAACACTAGCCGAGGAGTTTGATCAACAAGTAAATGCTTCAAGATCTAGCTTTGAAGGATCTCCTTGGGAGTATTGTTATGTGTCCAGTTCGCAAGAGTTGCCAAAGGTTCCCATCTTAACTATCATGTTCCAACAGAATAACAGTTTTGTGGTCGTTGATCCTGTGTTTGTATTCTATGGCAATCAGGGAGTTATTGGATTTTGTTTAGCCATACAGCCAGCCGAAGGGGATATGGGAACAATTGGACAGAACTTCATGACAGGATATCGTTTGGTATTTGATAGGGAAAACAAGAAGCTGGCATGGTCACCCTCAAATTGTCAGGATCTGAGTCTAGGTAAGAGGATGCCCCTTTCTCCAAATGAGACATCATCAAACCCATTGCCTACAGATGAGCAGCAAAGAACCAATGGGCATGCAGTTGCTCCAGCTGTTGCTGGAAGAGCTCCCCACAAACCTTCGGCTGCTTCATCTCGGATGATTACATGCCGGAAACATTGGCACTGCTTTTTGTTTCTTCTATTACAACTCGTGTCACCCTTTTATTGA 1563 0.4562 MLLLFLLLFLFEPTAHSMPFPITFSARLIHRFSEQMKPVGLPTGSWPDRRSMPYYQMLLSSDILRRKVNNGGARYQLLFPSHGSKTMSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWLPCDCIQCAPLSSSYYSNLDRDLNEYSPSRSLSSKHLSCGHRLCDMGSNCKSSEQQCPYMVSYLSENTSSSGLLVEDILHLQSGGGVANSSVQASVVLGCGMKQSGGYLDGVAPDGLIGLGPGESSVPSLLAKSGLIHDSFSLCFDEDDSGRIFFGDQGPTTQQSTSFLPLDGIYSTYVIGVETCCIGNSCLKMTSFKAQVDSGTSFTFLPGHAYGTLAEEFDQQVNASRSSFEGSPWEYCYVSSSQELPKVPILTIMFQQNNSFVVVDPVFVFYGNQGVIGFCLAIQPAEGDMGTIGQNFMTGYRLVFDRENKKLAWSPSNCQDLSLGKRMPLSPNETSSNPLPTDEQQRTNGHAVAPAVAGRAPHKPSAASSRMITCRKHWHCFLFLLLQLVSPFY* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2184 520 PANTHER ASPARTYL PROTEASES 7 462 IPR001461 GO:0004190|GO:0006508
Apr10g2184 520 ProSiteProfiles Peptidase family A1 domain profile. 97 441 IPR033121 -
Apr10g2184 520 Pfam Xylanase inhibitor N-terminal 98 279 IPR032861 -
Apr10g2184 520 Pfam Xylanase inhibitor C-terminal 319 441 IPR032799 -
Apr10g2184 520 Gene3D Acid Proteases 84 279 IPR021109 -
Apr10g2184 520 MobiDBLite consensus disorder prediction 449 475 - -
Apr10g2184 520 Gene3D Acid Proteases 282 447 IPR021109 -
Apr10g2184 520 PRINTS Pepsin (A1) aspartic protease family signature 103 123 IPR001461 GO:0004190|GO:0006508
Apr10g2184 520 PRINTS Pepsin (A1) aspartic protease family signature 321 332 IPR001461 GO:0004190|GO:0006508
Apr10g2184 520 PRINTS Pepsin (A1) aspartic protease family signature 417 432 IPR001461 GO:0004190|GO:0006508
Apr10g2184 520 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 7 462 - -
Apr10g2184 520 MobiDBLite consensus disorder prediction 449 476 - -
Apr10g2184 520 SUPERFAMILY Acid proteases 91 446 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2184 Apr-Chr10 34312702 34316589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2184 90 448 Miscellaneous Gene Families AT1G44130 25.326 5.93e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2184 - - gmx:100817311 941.028