Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2173 ATGGCCGAAACTCGCGACGCCGCCGCCGTCGATGGAGTTCCCGGAACGCCTGCCATAAGGGAAGTGAATTCCGGTGGGATTAGAAGGGTCAATTTCAGAGCAGAGATTGACACGTCACCACCGTTCGGGTCGGTGAAAGAGGCCGTGACCCGTTTTGGAGGTAGCGGGTCTTGGATACCACACTTTAACAGCATTGAGGATTTTGACATAAAGAAAGTGGAGGAACAAGCAGCGGAGTTGGAGAAGGATTTGATTGTCAAAGAACTTGAAACACTTGATGTGCTTGAAGAACTTGGTGCTACCAAGAGGATTGTGGAGGACTTGAAGCAGCAGCTACAGAAAGAGGCAATGAAATGTTTTGCAACTCGGGACGTAAGTTCATATGCTGGAACTCCTCTTGCTAAGGAGATGGATAAAGAAAATTATGGAAATATTGTCAATGATCAAGAACTGACAATGCAAATTCCAAGTCCTTGCTCTATGTCATCACCTGATATGATATTAATGGAGTTGAAACAAGCCAAATTGAACCTAGGGAAAACGATAAATGAACTTGGGGTAATACAGTCCTCTGTTGAATCTTTGAATAAGAAGATGAAAAAGGAGAAAATTTTTCTGGAGAGGACACGTGAAAAACTAGCATCAAAGTTTGCATCTGTCTCTGCAAAAGAGAGGGCCCAAGAGCAAACAAGATTGAATCAACCTGGGTCTCATGTCGAGTGCACTTCTGATAATACTGCAAATGTTACGAAGAATTTCAATTCTGAGCAGTGCAATAGGATGGTTGAAACAAGAAGATCTGAAATTTCAAAGCCCTTAACTGTTTATGAAGAACATGGGTATAATGTTAAGACTGCTGAGATGAGGTGGCTTGCAGCTAAAAAGATGGAAGAAGCAGCTAAGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAAGCTCTATCTAGTGCTGAGAGATCATTGGGGTTTGCTCTGCCAGAACCTGAGAAAATCACTTTCACTTTAGCAGGGCGCTCTCCCTTAAATCCCAAGGCTCAGATACTTGAGGAATCGACCTTGAAGAAGGTGATGGATTCTAAGTTTCAAATCAATGAATCAAATATTTCTAAACTGACTATTTTGAAGAAGTTGGAAGAAGCAACAAAAGAAGTTCTACTCAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAACTGCAAACAGAAAGCAACATGCTGCTGAGGAGGCGCTACGGAGATGGATTCCGGAGGATGACCTTAAGGAGTATCACTCTAAAAATTGCAACAAGTTCACTCAAGCTGGAATCTGTCAAGATTCATTGCCAGAGGTAACCAGGTCAACAATACCAAACAATAATCCAAAGCCTGTTTTAAGGCCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAGGTTTCTGAAGGATATGCCACAAGAAAGGAGATGGAAGAGCACACTGAAAGACAAAAGGTAGCATTGAGTCAAATGCTTCAAGCACTGAGGGATGATCTAACTCTTCCAGCAAAGACTGAGAAAGAGGGGAGTGATCAAAAGCAGTTCATGGGACACAGGAAGAAATTTGGATTCATCCAAATATCACTCCCCTTGGCGAAGCCAAGTAAGAGGAGGACATGA 1641 0.4254 MAETRDAAAVDGVPGTPAIREVNSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGSWIPHFNSIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCFATRDVSSYAGTPLAKEMDKENYGNIVNDQELTMQIPSPCSMSSPDMILMELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKIFLERTREKLASKFASVSAKERAQEQTRLNQPGSHVECTSDNTANVTKNFNSEQCNRMVETRRSEISKPLTVYEEHGYNVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSSAERSLGFALPEPEKITFTLAGRSPLNPKAQILEESTLKKVMDSKFQINESNISKLTILKKLEEATKEVLLSKQVLTDALNRVETANRKQHAAEEALRRWIPEDDLKEYHSKNCNKFTQAGICQDSLPEVTRSTIPNNNPKPVLRPTISMRDVLSRKQVSEGYATRKEMEEHTERQKVALSQMLQALRDDLTLPAKTEKEGSDQKQFMGHRKKFGFIQISLPLAKPSKRRT* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2173 546 Coils Coil 95 115 - -
Apr10g2173 546 Coils Coil 196 216 - -
Apr10g2173 546 Coils Coil 391 411 - -
Apr10g2173 546 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 7 545 - -
Apr10g2173 546 Pfam Weak chloroplast movement under blue light 169 418 IPR008545 -
Apr10g2173 546 Pfam Weak chloroplast movement under blue light 34 121 IPR008545 -
Apr10g2173 546 PANTHER WEB FAMILY PLANT PROTEIN 7 545 - -
Apr10g2173 546 Coils Coil 70 90 - -
Apr10g2173 546 MobiDBLite consensus disorder prediction 224 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2173 Apr-Chr10 34220163 34222881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2173 - - gmx:100776514 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1480 9 24365244 24368072 Apr10g2173 10 34220163 34222881 ECH
Apr10g2173 10 34220163 34222881 Apr10g2173 10 34220163 34222881 ECH
Apr10g2173 10 34220163 34222881 Apr9g1480 9 24365244 24368072 PCT