Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2167 ATGGAGGCAGTTCAGACGTGGGTCTCAGAGCACAAGCTAACCAGCATTGGGGCACTATGGGCCTCTGGAATTGGAGCATCACTCGTGGCTTATACGCGCACTAAGTCTCCATTGAAGCCTAGTCTCAGGCTTATCCATGCTAGGATGCACGCACAGGCGCTAACTTTAGCAGTGTTGTCCGGTGCAGCTGCTTATCACTACTATGAGAATCGCGCTGATCAACCAAAACCATTCGCTGATGGATCTGCTCCCAATGTCACCCAGCTGGTTGAATGGCAACTCCACTGTCCTTTCTAA 297 0.5118 MEAVQTWVSEHKLTSIGALWASGIGASLVAYTRTKSPLKPSLRLIHARMHAQALTLAVLSGAAAYHYYENRADQPKPFADGSAPNVTQLVEWQLHCPF* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2167 98 Pfam Hypoxia induced protein conserved region 10 61 IPR007667 -
Apr10g2167 98 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Apr10g2167 98 Gene3D - 13 72 - -
Apr10g2167 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 77 - -
Apr10g2167 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 77 IPR040153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2167 Apr-Chr10 34178653 34179352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2167 - - gmx:100500345 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2167 10 34178653 34179352 Apr10g2167 10 34178653 34179352 ECH
Apr10g2167 10 34178653 34179352 Apr9g1476 9 24330795 24331482 PCT