Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2161 ATGGTTTCAGTTGAGAATGGAATTGGGAATCCCAAAGATGAAATTGAGGAATCTAATGGGAGTAAAGTGAAGGAGTTTGCTTCTATAGACGTATCAACTACTCAAAGAACATTTCTGAGCAGTGAAGATCCTCAAAGAAAGCTTGAAGGCACCTCGAGTTCTTTTCCTTATAAATTTGGTTCTGCATCTCCCAAATTCAAGTGGCTTGCTACTGAGAGAGACCAGGTTTCACAATCTGTGCCTCCTCCTCGTTCAAAAAGCCTAAGAGCACGTTTTAGTAGCATATTTACTCAGAAACTTGAATTGGATTCTGTCAAGAAGATGTGCATTGAATGGATTAGAAACCCAATGAACATGGCCCTTTTTGTGTGGATCACGTGTGTTGCTATTTCGGGTGCAATTCTGTTCTTTGTCATGACAGGCATGTTAAACAATGTTCTACCAAGAAAGTCTCAGAGAAATGCATGGTTTGAAGTAAACAACCAAATACTCAATGCACTATTTACACTAATGTGCTTGTACCAACACCCAAAAAGGTGCTACCACCTTGTTCTTCTGTGCAGATGGAGACCAAATGACATCTCTAGACTTAGAAAGGCATACTGCAAGAATGGAACTTACAAGCCCCATGAGTGGGCTCATATGATAGTAGTGATCATTCTTCTTCATCTTAACTGTTTTGCTCAATATGCCCTCTGTGGTCTAAACTTGGGGTATACAAGGTCTGAGAGGCCTGCCATTGGAGTTGGAATATGTATATCTTTTGCAATTTCTGCTCCTGCAATTGCTGGCTTGTACACCGTTCTTAGCCCACTTGGGAGGGACTATGATTGTAAGATAGATGAAGAAGCACAGGTTCAAATCACTGCTTCTCAAAAACAAGAGCAGCTGAGAGAGCAACCATTTGAGAAGAAATATTTATTTGCATCCAAGGATCAACAAAGGATTGTGGAAAATAAACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAAAGATATTTCTTTGGCATATCTCTCACTTTTCTGCACTTTTTGTGTATTTGGGTGGAACATGGATAGACTTGGCTTTGGAAACATGTATGTTCACATTGCCACTTTTATGCTCTTTTGTATGGCGCCTTTCTGGATTTTCATATTGGCTTCAGTTAATATTGATGATGACAATGTAAGGCAGGCTCTAGTAGCTGTTGGAATCATTCTTTGTTTTCTTGGTTTACTATATGGTGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTACCTTCCTATGACTTCTGTTTTGGCAAACCTTCAGTTTCTGATTGCACACTTTGGCTATGCTGTTGCTGGTGCTCACTTGCTCAAGAAGCACGAACCGTGAATAACTATGATCTTGTAGAAGATAAATTCTCTAGGGAAGAAATTGATACTAGTGACCAACTATCAATTTCACCTTTGGCTAGAGAAAATGTTGTATCAACCAAATCTGGCACAGGTTCTCCTCTGGGTAGCAATGCTTTCCCTTGTATGATGAAAACATCTAGTCCTCCAAATTCAACCAATGTCTTGAAGGGATGTTGCAGTGTAAAAGAAGAGAATTGTGAAATCGGTAAAGATGGAATAATGAACCCACCAACTCTGTCACTAATACAAAGAGAAGCTCCTTAG 1653 0.3975 MVSVENGIGNPKDEIEESNGSKVKEFASIDVSTTQRTFLSSEDPQRKLEGTSSSFPYKFGSASPKFKWLATERDQVSQSVPPPRSKSLRARFSSIFTQKLELDSVKKMCIEWIRNPMNMALFVWITCVAISGAILFFVMTGMLNNVLPRKSQRNAWFEVNNQILNALFTLMCLYQHPKRCYHLVLLCRWRPNDISRLRKAYCKNGTYKPHEWAHMIVVIILLHLNCFAQYALCGLNLGYTRSERPAIGVGICISFAISAPAIAGLYTVLSPLGRDYDCKIDEEAQVQITASQKQEQLREQPFEKKYLFASKDQQRIVENKPKWSGGILDIWKDISLAYLSLFCTFCVFGWNMDRLGFGNMYVHIATFMLFCMAPFWIFILASVNIDDDNVRQALVAVGIILCFLGLLYGGFWRIQMRKRFNLPSYDFCFGKPSVSDCTLWLCCCWCSLAQEARTVNNYDLVEDKFSREEIDTSDQLSISPLARENVVSTKSGTGSPLGSNAFPCMMKTSSPPNSTNVLKGCCSVKEENCEIGKDGIMNPPTLSLIQREAP* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2161 550 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
Apr10g2161 550 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 322 457 IPR006461 -
Apr10g2161 550 MobiDBLite consensus disorder prediction 1 53 - -
Apr10g2161 550 Pfam PLAC8 family 323 453 IPR006461 -
Apr10g2161 550 Pfam Protein of unknown function (DUF2985) 111 189 IPR021369 -
Apr10g2161 550 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
Apr10g2161 550 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2161 Apr-Chr10 34144774 34147264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2161 - - gmx:100811964 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1470 9 24268713 24271507 Apr10g2161 10 34144774 34147264 ECH
Apr10g2161 10 34144774 34147264 Apr10g2161 10 34144774 34147264 ECH
Apr10g2161 10 34144774 34147264 Apr9g1470 9 24268713 24271507 PCT