Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2159 ATGGGAAAATCTCTTGAATCTGCGGCGAGATTGCACCATCTCTCGCGGATCGTTTCATCTACGAAACCCCATAAGCCGAAAGGAACACAATCCAGAATTCCGAACCGGGTTGCCACCCCTCGAACCGTGAACCCGGATAGTGTTAAGGTTGAATCTCTGAAAAAAATGGAAGCTTTGGAAGTGGAGCAATGTCGCACACCCTTGTCCAAGGTTGTCGCCGATTGCGCCAAACGGTGGTTTCAGGACACGCTTAAGGAGGCTAAGGCTGGTGATAGTTCCATGCAGGTTTTGGTTGCTCAAATGTATTGCTCTGGCTATGGTGTTCCAAAGGATCCTCAAAAGGGACATGCTTGGATTAGTAAAGCTTCAAGAAGTCGAAATTCAGTTTGGAGAGTATGCGGTAAACATCCAGGTTACAATGCAAGTGATTCAGATTCATGTGACCAGGAGAACAAACAACGAAGATAG 468 0.4679 MGKSLESAARLHHLSRIVSSTKPHKPKGTQSRIPNRVATPRTVNPDSVKVESLKKMEALEVEQCRTPLSKVVADCAKRWFQDTLKEAKAGDSSMQVLVAQMYCSGYGVPKDPQKGHAWISKASRSRNSVWRVCGKHPGYNASDSDSCDQENKQRR* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2159 155 Gene3D Tetratricopeptide repeat domain 44 133 IPR011990 GO:0005515
Apr10g2159 155 SUPERFAMILY HCP-like 83 124 - -
Apr10g2159 155 MobiDBLite consensus disorder prediction 22 39 - -
Apr10g2159 155 MobiDBLite consensus disorder prediction 136 155 - -
Apr10g2159 155 MobiDBLite consensus disorder prediction 1 39 - -
Apr10g2159 155 PANTHER EXPRESSED PROTEIN 1 154 - -
Apr10g2159 155 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2159 Apr-Chr10 34129839 34132744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2159 - - gmx:100779520 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2159 10 34129839 34132744 Apr10g2159 10 34129839 34132744 ECH