Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2158 ATGGCAAATGTTGTGGAAGTTAAAGTCGGTTTGCACTGTGATGATTGTATCAAGAAAATCCTTAAAGCCATCAAGAAAATTGAAGATATTGAAACGTATAACGTGGATACAGAGTTGAACAAGGTGATCGTTACGGGCAAAGTCACGAAAGAAGAAGTGATAAGAGTTCTTCAAAAGATTGGAAAGAATGCAACTGCTTGGGAAGATGCTTAA 213 0.3709 MANVVEVKVGLHCDDCIKKILKAIKKIEDIETYNVDTELNKVIVTGKVTKEEVIRVLQKIGKNATAWEDA* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2158 70 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Apr10g2158 70 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Apr10g2158 70 Gene3D - 2 68 - -
Apr10g2158 70 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 70 IPR045181 GO:0046872
Apr10g2158 70 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Apr10g2158 70 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2158 Apr-Chr10 34128485 34129090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2158 - - gmx:100812505 110.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2158 10 34128485 34129090 Apr9g1468 9 24259461 24260544 PCT