Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2156 ATGAGAATTTCGTCTTCATCTTCATCTTCCCAAAGCCTCAAAATTGGCATAGTTGGGTTTGGCACTTTTGGCCAATTTCTGGCAAAGACAATGATAAAACAAGGCCACACTCTAACAGCAACTTCTCGAACAGATTACTCTGATCTTTGTCTCCAAATGGGTATACATTTTTTCAGGGATGTCAGCACATTCCTAGCCTCAGACATGGATGTCATACTTTTATGCACATCCATCATGTCACTGTCCGAGGTTGTCAGGTCAATGCCACTCACTTGCCTGAAGCAGCCAACACTCTTTGTTGATGTTCTTTCAGTCAAAGAGCACCCAAGAAATCTTCTACTACTAATGTTGCCAGAGGAGGCAGATATACTCTGCACGCACCCAATGTTTGGACCAGTGAGTGGCAAGAATGGATGGAGAGATCTGACTTTCATGTATGACAAAGTTCGAATTCGAGATGAAGCTACTTGCACTAATTTCCTCCATATTTTTTCTAGTGAGGGTTGCAAGATGGTACAAATGTCCTGTGAGGAGCATGACAAAGCAGCTGCAAAGAGCCAATTTATCACACACACAGTAGGAAGGACATTGGCAGAAATGGACATTAAATCTACACCTATTGACACCAAGGGCTTTCAGGCACTTGTTCAAGTGAAGGAAACCATGGTGGGAAATAGTTTTGATCTGTATATTGGATTATTCGTGCATAACAGATTCGCCAGACAAGAGCTGGAAAACCTCGAACATGCCTTGTCCAAAGTGAAAAAAATGCTGATTCAAAGGATGAATGAAGAGCAGGGTCAAGAAAACAGAACTGAAAGTTGA 825 0.4206 MRISSSSSSSQSLKIGIVGFGTFGQFLAKTMIKQGHTLTATSRTDYSDLCLQMGIHFFRDVSTFLASDMDVILLCTSIMSLSEVVRSMPLTCLKQPTLFVDVLSVKEHPRNLLLLMLPEEADILCTHPMFGPVSGKNGWRDLTFMYDKVRIRDEATCTNFLHIFSSEGCKMVQMSCEEHDKAAAKSQFITHTVGRTLAEMDIKSTPIDTKGFQALVQVKETMVGNSFDLYIGLFVHNRFARQELENLEHALSKVKKMLIQRMNEEQGQENRTES* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2156 274 Gene3D - 2 180 - -
Apr10g2156 274 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 175 260 IPR008927 -
Apr10g2156 274 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 1 270 - -
Apr10g2156 274 Coils Coil 237 257 - -
Apr10g2156 274 PANTHER AROGENATE DEHYDROGENASE-RELATED 1 270 IPR045011 GO:0006571|GO:0033730
Apr10g2156 274 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 13 274 IPR003099 GO:0004665|GO:0006571|GO:0008977
Apr10g2156 274 Pfam Prephenate dehydrogenase, nucleotide-binding domain 35 138 IPR046826 -
Apr10g2156 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 174 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2156 Apr-Chr10 34120896 34122940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2156 K15227 - gmx:100787362 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2156 10 34120896 34122940 Apr10g2156 10 34120896 34122940 ECH