Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2155 ATGAAGCCACACACTCGGGCTTCTTTCAACACTTACCCTCCGCACGTGCCTTTCCTTCGCCCCGCCACTGCCACACGTGTTGCGACATTCGAGACACGTCATGACGCCGCCGGCAACCAATTCCGGCGCGTCTGGACTACTAAACGCCGCCGCCTCGACCTGTCCGTCCGTCACTCGAATCGCGTTGTGGCGGCTTCGAAACCTGAAGCTCCCGACGGCGAACGCGTCGAGACTCGAGTTCGAAGCAACCGGCGAGGCGTGTTGATGGCGCCATTTCTGGCCGCGGGCGCGTCGATTCTGCTCTCGGCGGCGGCGACGGCGAGGGCGGAGGAGAAGGTGGTGGAATCGACGGCGCCGAAAGTGGAGGAGCAGAAGAAGATAGAGGAGGCGGAGGGAGAAGTGATAACGTCGAGGATTTACGACGCGACGGTGATAGGGGAACCGTTGGCCATAGGGAAAGAGAAAGGGAAAGTCTGGGAGAAGTTGATGAATTCGCGAGTGGTTTATTTGGGAGAAGCAGAACAAGTTCCGGTTCGAGATGATAAGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAGACGCTGTTTGGAGAAGGAGAAGCGATTGTCTTTGGCTCTTGAAGCATTTCCCACTAATCTTCAGGAACCGCTCAATCAGTATATGGATAAGAAGATAGATGGAGACACCTTGAAGTCTTATACATTACACTGGCCGCCTGAAAGATGGCAGGAGTATGAACCTATTCTGAGCTACTGTCGTGAAAATGGAATTCGTCTTGTTGCTTGTGGTACTCCACTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAACTATATGCACCTCCAGCTGGCTCAGGCTTCATATCAGGCTTTACTTCTATGTCACGTAGACCTTCAGTTGATAGTACTCAAAATCTGTCCATTCCTTTTGGTCCAAGCTCATATCTTTCTGCACAAGCTAAAGTAGTTGATGAGTATTCAATGTCCCAGATCATCTTACAGAATGTACTGGATGGAGGGGCCTCTGATATGTTAATAGTTGTGACTGGAGCAAGCCATGTTACATATGGATCTAGAGGAACTGGACTGGTGGCAAGAGTTTCACAAAAAATACAAAAGAGAAACCAAGCAGTTGTATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAGGGAGAAGTTCCTGTCGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGTGTTATGAATGCTGCTGGACGGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAAGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAAAACTTCTTTGATCTGGAGCAGTATCCTCTGATTTCAGAACTCACACACCGTTTCCAGGGATTCAGGGAAAGATTGTTGGCTGATCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCAATTACGACTACACTATTGGCACAGTATGAAAAGAGGAAAGAAAATTTTTTTCAAGAGCTCGACTATGTTATTACAGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTTCTTTCATATGCCGATGAGATGAATGCACCTGACAACCTTGGTTCTCTGATGGGTCTTCTTGGCTCCATTCCAGATAATGCATTTCAAAAGAATCCAGCAGGGACAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTCGGTGGGCTAAAACTTGCTAGTGTTGGATTTATTTCAAGCATAGGAGCTGTGGCTTCATCAAATTCTCTGTATGCAATTCGTAAATTCCTTAATCCAGCAGTTGCCACTGAACAACGGATTATAAGGTCCCCAATAATCAAAACAGCAGTTATATATGCATCCTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTTCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTAGCACGGACAATCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTAGCACGCTTTACTGGCCTACAAGTTAGAAAGACAGAGTCACCAACATCAGATTCCCCAAATCACACTGCTATTTTATGCAACGAAACAGAAGAAGCCAACGTTGATGACGTACAAAATAAATGA 2241 0.4574 MKPHTRASFNTYPPHVPFLRPATATRVATFETRHDAAGNQFRRVWTTKRRRLDLSVRHSNRVVAASKPEAPDGERVETRVRSNRRGVLMAPFLAAGASILLSAAATARAEEKVVESTAPKVEEQKKIEEAEGEVITSRIYDATVIGEPLAIGKEKGKVWEKLMNSRVVYLGEAEQVPVRDDKELELEIVKNLHRRCLEKEKRLSLALEAFPTNLQEPLNQYMDKKIDGDTLKSYTLHWPPERWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGIRGLTKAERKLYAPPAGSGFISGFTSMSRRPSVDSTQNLSIPFGPSSYLSAQAKVVDEYSMSQIILQNVLDGGASDMLIVVTGASHVTYGSRGTGLVARVSQKIQKRNQAVVLLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMNAPDNLGSLMGLLGSIPDNAFQKNPAGTNWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYAIRKFLNPAVATEQRIIRSPIIKTAVIYASFLGISANLRYQIIAGIVEHRISEQFSSQTFLVNMLSFVARTINSYWGTQQWIDLARFTGLQVRKTESPTSDSPNHTAILCNETEEANVDDVQNK* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2155 746 Pfam Protein RETICULATA-related 484 668 IPR021825 -
Apr10g2155 746 Pfam Haem-binding uptake, Tiki superfamily, ChaN 158 376 IPR007314 -
Apr10g2155 746 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 49 746 - -
Apr10g2155 746 SUPERFAMILY EreA/ChaN-like 157 413 - -
Apr10g2155 746 Gene3D - 151 310 - -
Apr10g2155 746 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 49 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2155 Apr-Chr10 34114060 34120264 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2155 - - gmx:100810366 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2155 10 34114060 34120264 Apr10g2155 10 34114060 34120264 ECH