Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2154 ATGGACTCCTCCGCTGCCATTCGATCCTTTCACTATCCCGTAGGAACTATGTCCCATATGCGACCCTCCCTTGAGAAGCTTGCTGTAGTTCCCATCCATAATGTCAGATGGAACTCTAAAAGTAGACTTTTCATTCAGCATTTGGCAAATGGCGAGAAGCACATTAATTCTCACATGAAGGGGAAGAACACAATAGTGTCATGTGCTAAAACAGCTGAAGCTATCAACACAACCAAGTCTGATGCTTCTTCAGATAGTGCTATAAAAGGGTCATTGGAGAAAAAGCCTTTGCAGAGTGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTCTGTGATGAGACTGAAATTGCTGAACTGAAAGTAAAGGTTGGAGACTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAAATGCTCCTTTGTCCAACATTTCACCAACTACACCACCACCTATTCCAAGTAAACCTATGGATGAATCAGCATCTGGTAGCCTACAACCATCGCCACCAAAATCATCACCAGAAAAGACCAACCCATTTGCAAATCTTCCAAAAGAGAGGTCATCAAAATTGGCAGCATTGGAGGCTTCCGGTACCAATAACTATGTCTTAGTATCATCTCCCACAGTTGGCTTATTCCGAAGAGGTAGAACAGTGAAAGGGAAGAAGCAACCTCCTATCTGTAAAGAGGGTGATGTTATCAAAGAAAGCCAAGTCATAGGGTATTTGGATCAGTTTGGCACTGGACTTCCTGTTAAGGCTGATGTGGCTGGAGAAGTGTTGAAGCTACTTGTTGACGATGGAGAGCCTGTTGGTTATGGAGACCCTCTTATTGCCGTCTTGCCGTCATTTCATGACGTCAAGTGA 876 0.4326 MDSSAAIRSFHYPVGTMSHMRPSLEKLAVVPIHNVRWNSKSRLFIQHLANGEKHINSHMKGKNTIVSCAKTAEAINTTKSDASSDSAIKGSLEKKPLQSATFPNGFEALVLEVCDETEIAELKVKVGDFEMHIKRNIGATNAPLSNISPTTPPPIPSKPMDESASGSLQPSPPKSSPEKTNPFANLPKERSSKLAALEASGTNNYVLVSSPTVGLFRRGRTVKGKKQPPICKEGDVIKESQVIGYLDQFGTGLPVKADVAGEVLKLLVDDGEPVGYGDPLIAVLPSFHDVK* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2154 291 Pfam Biotin-requiring enzyme 224 281 IPR000089 -
Apr10g2154 291 CDD biotinyl_domain 208 283 - -
Apr10g2154 291 Gene3D - 204 283 - -
Apr10g2154 291 MobiDBLite consensus disorder prediction 140 186 - -
Apr10g2154 291 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 291 - -
Apr10g2154 291 MobiDBLite consensus disorder prediction 162 186 - -
Apr10g2154 291 SUPERFAMILY Single hybrid motif 199 282 IPR011053 -
Apr10g2154 291 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2154 Apr-Chr10 34106650 34112621 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2154 208 285 Acyl Lipid Metabolism Gene Families AT5G15530 29.487 6.00e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2154 - - gmx:100792471 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2154 10 34106650 34112621 Apr10g2154 10 34106650 34112621 ECH