Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2144 ATGGTCAAGAAGAGTTGGTATGGGATGATTCCTCAGCTTCTTCGAGCCTATATAAATCGCCTATTCTTAATCAATATCCGTAACATTCTACGTTTTTTCATCGTAGCAATTGAAAGTTTCTACCTTTTTGTCACCATGTCCAACCCCAAATCAGAGTCAGAGTCTCAACCCTCTGCTTCAGAAGCTGCACCCTTCGATCCCACACAACCCTCGATACCCATTTCTTATCCAATGAAAACCCTTGAGGAACTCGAGTCTCGCTCCTACTTCGAGTCCTTTCACTACCCTTTCAACAAAGCTTCGGTTCCCATTGTTCCCAATGCTTCTTCGTTACCCAATAGGCGAAGATTGCTAGTGTGTCATGATATGGCTGGGGGTTACTTGGATGATAAGTGGATTCAAGGTGGCACAAACCCTCATGCTTATGCAATTTGGCATTGGCATTTGATCGATGTTTTTGTCTACTTTTCCCACACCCTTGTTACTCTTCCTCCTCCTTGCTGGATTAACACTGCTCATCGCCATGGTGTTAAGGTGTTGGGGACTTTCATCACCGAATGGGATGAGGGAAGGGCTGCCTGTGATACACTGCTTTCAACAAAGGAATCTGCACAAATGTACGCAGAACATCTGGCAGAGCTCGCTGTTGATTTAGGCTTTGATGGGTGGCTAATAAATATGGAGGTAAATTTGAATCCAGGGCAAATTTCTAATTTGAAAGAGTTTTGGTTGATGCCAAAAGTTGAATATGATGTTTCTTGGTCATGTAGGTATGACAGTGTTACAGTCGATGGTAAACTGAAGTGGCAAGATCAACTAAACAAGCATAATAAGCCATTCTTTGATATATGTGATGGAATATTTGTAAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCCAGTGATCGGAAGTATGATGTATACATGGGAATTGATGTATTTGGGAGGAACACATATGGTGGTGGGCAATGGAATGCAAATGTTGCTCTTGATTTACTGAGAAAGAATGACATCTCTGCTGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAACAAGCCCCTGATTTTGAGACTGCTCAAAATAGTTGGTGGGGTCTTGTGGAAAATTCATGGGGAGTGCTGCAAAAAAGTCCTGGAGTACTACCATTCTACACAAATTTTGATCAGGGACGTGGTTATCATATTTCAGTTCATGGTGACAATGTATCAGAGGCCACTTGGAACAATATTTCTTGCCAAGGCTTTCAGCCACTCCTTGAGTTTGCTGATCCTACAAATTCTATTCAAGTTCTTGTAGACTTGAAGGAAACATCATATAGTGGAGGGGGGAACGTTACATTCAAAGGGTCTCTTGGAGAGCAAAATTACATTGAGAAGAAAATCTTTCAAGGACAGCTTCTTTTGAGCAAGTTGCCCATCCACTTTATTTATTCTGTCAAATCTGATGGCAATTCCTCATTGGGACTTAAGCTTGAGTTCACTTCCACCAACCACCAAAGAACATCTATACTTCTCACATCCTGGGTGGCGAATCATTTCTCAAGCAAATTCAGCAAAGTAATCATGACTCGTGAACACAAGGAATTTTCCCCTGGATGGGTTATAAATGAAGGCGTAATTGCAATGAATGAATCATACACCTTAACAGAAATCCATGCAGTGTGCTACAGATCAGATTCTCCATTCAATGACAGTGATGGAACGGTGGCTTCTTCATCAGAGTATTTTGCACTTCTTGGTCATATCACAATCAAGACTTCTGACTACAAGTCAGATTTTCCTGTGTCTTCTTCCTGGATAGTTGATGGCAGCTACATAAAATGGATATCAGGTTCTCTAGGTTCAAAGACCCTTAGCGTTAAAATTTCTTGGAATCTAAAAGACGTAGAGAACTATCTGTTTCCAAAGTACAATGTGTATTTGGTGAAATTATCAAAGCAAGAGTCTGGTAAACCAGGTACAACATTAGATCATGTGAAAGAGTACCTTGGAGTAGCACAAGTAAACTGTTTTTATGTTTCTGATCTCAAAGTTCCTTCAGGAACTTCAAGTCTCAAATTTATAATACAAGTCTGCGGTGTTGATGGGACACTTCAGGAGCTGGATGAGTCTCCATCTTATGAATTGGAGGTTGAAGCTCCCTAA 2163 0.411 MVKKSWYGMIPQLLRAYINRLFLINIRNILRFFIVAIESFYLFVTMSNPKSESESQPSASEAAPFDPTQPSIPISYPMKTLEELESRSYFESFHYPFNKASVPIVPNASSLPNRRRLLVCHDMAGGYLDDKWIQGGTNPHAYAIWHWHLIDVFVYFSHTLVTLPPPCWINTAHRHGVKVLGTFITEWDEGRAACDTLLSTKESAQMYAEHLAELAVDLGFDGWLINMEVNLNPGQISNLKEFWLMPKVEYDVSWSCRYDSVTVDGKLKWQDQLNKHNKPFFDICDGIFVNYTWKEDYPRLSAAVASDRKYDVYMGIDVFGRNTYGGGQWNANVALDLLRKNDISAAIFAPGWVYETKQAPDFETAQNSWWGLVENSWGVLQKSPGVLPFYTNFDQGRGYHISVHGDNVSEATWNNISCQGFQPLLEFADPTNSIQVLVDLKETSYSGGGNVTFKGSLGEQNYIEKKIFQGQLLLSKLPIHFIYSVKSDGNSSLGLKLEFTSTNHQRTSILLTSWVANHFSSKFSKVIMTREHKEFSPGWVINEGVIAMNESYTLTEIHAVCYRSDSPFNDSDGTVASSSEYFALLGHITIKTSDYKSDFPVSSSWIVDGSYIKWISGSLGSKTLSVKISWNLKDVENYLFPKYNVYLVKLSKQESGKPGTTLDHVKEYLGVAQVNCFYVSDLKVPSGTSSLKFIIQVCGVDGTLQELDESPSYELEVEAP* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2144 720 Gene3D Glycosidases 68 382 - -
Apr10g2144 720 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 12 718 - -
Apr10g2144 720 Gene3D - 386 540 - -
Apr10g2144 720 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 12 718 IPR032979 GO:0033925
Apr10g2144 720 CDD GH85_ENGase 118 432 - -
Apr10g2144 720 Pfam Glycosyl hydrolase family 85 127 400 IPR005201 GO:0005737|GO:0033925
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2144 Apr-Chr10 34031813 34038052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2144 68 718 Glycoside Hydrolase AT5G05460 55.639 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2144 K01227 - gmx:100804658 1138.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2144 10 34031813 34038052 Apr10g2144 10 34031813 34038052 ECH