Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2142 ATGTTTCTCAGAGCTGCTTCCTCTTTCTCTCTCCTCAACGTCAATGGCGATCACTTGCTCCCGCTGTTCAACTCTTCTTCGTTGCCCTCTGTTGTTGGCTACTCTCACGGAAAAAGTGGGAACAGCTTGGTTACCTGTGCCACCAAGGACTCCAATAACCGTCCCTTAACCGGCGTCGTTTTTGAACCCTTTGAAGAAGTGAAGAAGGAGCTCGACCTTGTTCCCACCATCCCACAAGCTTCCATTGCTCGCCAGAAGTACACTGATGAGTGTGAAGCTGCTATTAACGAACAGATCAATGTGGAGTACAATGTTTCGTACGTTTATCATGCGATGTTTGCCTACTTTGATAGGGACAATGTTGCGCTGAAGGGTCTTGCTAAGTTTTTCAAGGAGTCAAGCGAGGAGGAAAGGGAGCATGCTGAGAAATTGATGGAATATCAGAACATACGGGGTGGAAAAGTGAAGTTGCAAGCTATAGTGATGCCAGTCTCTGAGTTTGATCATGTGGAAAAGGGCGATGCACTATATGCAATGGAACTTGCCCTTTCATTGGAGAAGCTAACAAATGAAAAACTGCTTAACTTGCACAGTGTTGCCTCAAAGAATGATGATGTGCAGTTGGCAGATTTTATTGAAAGCGAGTTTTTGGGTGAACAGGTGGAAGCCATTAAAAGAATTTCCGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTCGATCAGATGCTGCTCCATGAGGAGGGAGTTGGTGCTTGA 777 0.4595 MFLRAASSFSLLNVNGDHLLPLFNSSSLPSVVGYSHGKSGNSLVTCATKDSNNRPLTGVVFEPFEEVKKELDLVPTIPQASIARQKYTDECEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNIRGGKVKLQAIVMPVSEFDHVEKGDALYAMELALSLEKLTNEKLLNLHSVASKNDDVQLADFIESEFLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEEGVGA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2142 258 Pfam Ferritin-like domain 93 237 IPR008331 GO:0008199
Apr10g2142 258 ProSitePatterns Ferritin iron-binding regions signature 2. 205 225 IPR014034 -
Apr10g2142 258 PANTHER FERRITIN 1 256 IPR001519 GO:0006826|GO:0006879|GO:0008199
Apr10g2142 258 PANTHER FERRITIN-2, CHLOROPLASTIC 1 256 - -
Apr10g2142 258 ProSiteProfiles Ferritin-like diiron domain profile. 85 238 IPR009040 -
Apr10g2142 258 CDD Euk_Ferritin 89 248 - -
Apr10g2142 258 SUPERFAMILY Ferritin-like 79 252 IPR009078 -
Apr10g2142 258 Gene3D - 54 255 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2142 Apr-Chr10 34015085 34017707 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2142 K00522 - gmx:547476 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1454 9 24145237 24147756 Apr10g2142 10 34015085 34017707 ECH
Apr10g2142 10 34015085 34017707 Apr10g2142 10 34015085 34017707 ECH
Apr10g2142 10 34015085 34017707 Apr9g1454 9 24145237 24147756 PCT