Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2135 ATGGCGAACGTCGATGAACTCTTATCTTCCTTAATCTCAGACATCAATTCCTACACCGGCAAAGACCCTCTTCTACCTTGGCTTCGAGCGATCCGAAAGATGAAGGATACTCTTCCACCCGTAACCCTAAACGAAAAATTACCCGAGTTATTGCAGAAATGCGCCCACACCTTCGAGCTCGATCGGCGTTACAGAAACGATATGCGCTATCTTCGGGTTTGGCTCCACCTGATGGACTTCGTGGATGATCCAGAATCTCTTTTGAAAATCATGGAGGTTAATCATATTGGGACAAAACGTTGTCAATTCTACCAAGCATATGCTCTTTACTACGAGAAGAGCAAGAAGTATGAGGAAGCAGAGAAAATGTACCATTTGGGAGTGAAAAACCTCGCAGAGCCTCTAGATGAATTGCAGAAATCATTTGAACAATTTCTTCAACGCAAGGAGCGAAGGAATAACAAGAAAATCCAGGATGAGAGCAACAGATTTCGTGGTGATGATACAGTTGTAGTCAAGTTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTGGTGGACCCTACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCCGGGAGCCATTAGAGACTGTTCCATTAGCCAGGAAATCACATAAAAACCATTCAAAAGAAGATCGTAGTACAAATAATGATTTTGAAGTTTTTGTTGATGAAAACTTGGATAGTGGAATCAAACCATCCAGTTCCTTATCACTTCAGCACAGGGCTGAAGCTAGCCAACCTCCCCAAGAACCACTCCAGATATATATTGATGATGAAGTACATTCTGAGAGCAGTGATGTGAATGTGAATTTGTCTGAAGGTTGTACTTCAGCTTCTCAACCAAATGGCTTTGTTTTTCCCCATCCCAAGGATATTCCTTCTGAAAAGTCTAGTGATATGGATGTTGAAAGCTCTCGAAATTCAAAGTTCAGAGAAGATACAATCGTTTGCAGATTTGTTGGTTCTACAATTTTGGATGAACCAGAGGTGGAAAATGTTTGCCACCATGGTTTAGTAGACCCCACTATCAACCTGAAGGAAGCTATGGATGACATAAATAACATGTTTGGAAAGCCAATAGATTTTGTTAGAAGAAGAAGAACAACCAAGCAGGAGAAAGCACCCGAAAGCAATAGTAGAAAGGACATTGGTGGGTTTTCAATATTTGCTGACGATGATGATCACATGGAACAAGAAGGTCCACCACCACCGCCACCCCAAAAATTGGCAGGAAAGTCAAAGGAATCTGATTTGTTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGATATAAACAAGATGTTTAATATGCCCCTGAATTTTTAG 1392 0.4159 MANVDELLSSLISDINSYTGKDPLLPWLRAIRKMKDTLPPVTLNEKLPELLQKCAHTFELDRRYRNDMRYLRVWLHLMDFVDDPESLLKIMEVNHIGTKRCQFYQAYALYYEKSKKYEEAEKMYHLGVKNLAEPLDELQKSFEQFLQRKERRNNKKIQDESNRFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLARKSHKNHSKEDRSTNNDFEVFVDENLDSGIKPSSSLSLQHRAEASQPPQEPLQIYIDDEVHSESSDVNVNLSEGCTSASQPNGFVFPHPKDIPSEKSSDMDVESSRNSKFREDTIVCRFVGSTILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRRRRTTKQEKAPESNSRKDIGGFSIFADDDDHMEQEGPPPPPPQKLAGKSKESDLFEPTLLTKEAMDDINKMFNMPLNF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2135 463 MobiDBLite consensus disorder prediction 384 400 - -
Apr10g2135 463 Gene3D - 9 165 - -
Apr10g2135 463 MobiDBLite consensus disorder prediction 384 443 - -
Apr10g2135 463 MobiDBLite consensus disorder prediction 286 304 - -
Apr10g2135 463 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Apr10g2135 463 ProSiteProfiles BUB1 N-terminal domain profile. 11 166 IPR013212 -
Apr10g2135 463 MobiDBLite consensus disorder prediction 313 327 - -
Apr10g2135 463 MobiDBLite consensus disorder prediction 284 327 - -
Apr10g2135 463 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 159 463 IPR015661 GO:0007094
Apr10g2135 463 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 162 IPR015661 GO:0007094
Apr10g2135 463 PANTHER OS11G0128700 PROTEIN 159 463 - -
Apr10g2135 463 PANTHER OS11G0128700 PROTEIN 4 162 - -
Apr10g2135 463 SMART mad3_bub1_i 4 128 IPR013212 -
Apr10g2135 463 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2135 Apr-Chr10 33973664 33975944 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2135 - - gmx:100783816 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2135 10 33973664 33975944 Apr10g2135 10 33973664 33975944 ECH