Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2105 ATGAGGATCACGGCGGAGCCGAGCTCGGAGCCAAGCCGCTCTCCAACTCCCAAAGACGAAGTTGAATGGCTCCCACTTCCCAAACACCCTCTCTTTACTGCCGCCGCAAACGGTGGTTCCGGCACCGCCATTTCCCGGAACCTACTTGCCTGGGACGGAGCCTCTCGCCTCTACTTTTGGGACTCCAACAACAACTTCCTCCATCGCCTCTCTCTTCGCCTCGGCGACCCCGATCCACCTTCCGTCCTCGCTGCTTTCCCTTCTAAGGTGTTACAAGCGGACGGGGTGCTTGATTTCGATGTTCAGAAAATCTCCATCAACCGGAACGGAACTGCAATACTCCTTTTTGGTTCTGAAAGTCTCTGTGTTATGTACCCCTATGGACGCACTTCTAGAAAGGACGTGAACTTGATTTGCAGGACTATTACTGTTGGTTCTCAAACGTATTCTACCGGCAGCAAAGATATTCGTGTGTTACAAGCGTTATGGCACCCTTACAGTGATACTCATTTGGGAATCCTTTCTTCTGATTCAGTTTTCCGGCTTTTCAATCTGGCTGTGGATCCTTTGCAACCGGAGCAAGAATATTATTTACAGCCTGTTGAGCCTGGTAGATCAAGGAATGCCTCATCAGTGTGCCCGATTGATTTTTCTTTTGGGGGAGACCACTTATGGGACAGTGATGGGGCTATTTATGTACTTTGCCCTGTTGCTCCATTTGGAAGTTTCTTCAAATGTGAGCCTCTATTAGAAATATACAATGATGCTCATACATTTGGGCTAATATCAGCCAACTCTTTAGCGGCTAGTAATTCAAAGTTAGCAATCTCCTGGTTAGAAGCAACATTTCCCGAGTTACAGAACCAAGAAACTGAAGGAGACAACCTGTCTTTGCTAAGAGCTCACGCTTATGCTTTATTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGGACAGGAATGAAGATTCAGTTGGTCGTAGTGCAGAATGTGAAGGCCGTGCAGTTAATTTTCTTTATAATTTAGTCAGCAAAGACTCTATTTTGGTGACTGCCTGGACTGGTGGGCAATTACAGATAGATGCTCTAGCCGATGAAATCCAACCTGTCTGGAGTATTGGTAGTCCACCTCGTCTTCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTGCCAGCGGCTGTCTGGAGAAGCTTGATCATAATGCCTGGTTGGGTAATCCACCACCCTTGCTGAGACTTGCCGTTGTTGATTTGGCTCTGCCACAAAGAGCAGAAAGTGGTTATAATATTTCATTGTTCATTGATACCCTTATGCCAGAAAGAATATATTCTCTCCATGATGGAGGGATTGACTCAATAGTTTTGCATTTTCTTCCATTTACAAGTCAGACAACTGGCAAGGATGATACAATGAGAACGCCGTCTGTGCATCCTGTTCTAAATACTTGCCAGAGTGGATGCACCTCAGAGCCTTCATTCTGTGGCTTTGTGTCATTATCAGATTCATTTGGATATTCATGGATTGTAGCTATTACTCTTTCTCATGAGTGTGTCATGTTTGAGATGAAAACTTGGAACCTGTTGCTTCCAGTAAGCATTGATATGGAGAAGAAACCCATTCCACCAGAGGGGGAATCAAAAGAGAGAGAGATACCAACAATAATTAGCAAAGAACTGCTTAGTGGTCCCAAGGAGGTGCTTGTTCCTCAGGCCTCTCCAAGTTTGCGATCGGTTGCTTCTGATTCAATTGAAGGCCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGCACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTAAAGAAAATCATTAATGACCAACATTCAAGGTTAGCAGAAGCACAACAGAAACTATTGAAAGTCGAGGAGAAAGAGTCTATATTACAAAAAAGGATAGATCGTGCAATTCAAATGCACAATTCTTTGGAAGATCGCTTGCAACAATTAAGGAACTTACCTTGTGCTCATAAAAAACCACTCTCTAGTGCAGAGCGTCAATTTAAATCTGAGCTTGACCACTTCAAGGATGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCACTAAATGCAAGGCTGAGAAGGCACTTGCAAGCTTCAAAAGCCAGTCACCAACAACAGAAAACATCAGGGAAGAAAACTTATGGTGGAGATGATCAGATATCCATGCTCAAATCATCGCTCGAAAAACTTTCACTTGTAAATAATGAAAACTCAAAGAAAGTTAAACTTGTGGAGTCTACATTGAGAAGCAAAGAAAGAAGCAGCCGAGAATCAAGCCTGCCTCTGCTCTAA 2382 0.44 MRITAEPSSEPSRSPTPKDEVEWLPLPKHPLFTAAANGGSGTAISRNLLAWDGASRLYFWDSNNNFLHRLSLRLGDPDPPSVLAAFPSKVLQADGVLDFDVQKISINRNGTAILLFGSESLCVMYPYGRTSRKDVNLICRTITVGSQTYSTGSKDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRSRNASSVCPIDFSFGGDHLWDSDGAIYVLCPVAPFGSFFKCEPLLEIYNDAHTFGLISANSLAASNSKLAISWLEATFPELQNQETEGDNLSLLRAHAYALFDASLVLQGPLRRVGQDRNEDSVGRSAECEGRAVNFLYNLVSKDSILVTAWTGGQLQIDALADEIQPVWSIGSPPRLRVDSHDQILGLAMICESIASGCLEKLDHNAWLGNPPPLLRLAVVDLALPQRAESGYNISLFIDTLMPERIYSLHDGGIDSIVLHFLPFTSQTTGKDDTMRTPSVHPVLNTCQSGCTSEPSFCGFVSLSDSFGYSWIVAITLSHECVMFEMKTWNLLLPVSIDMEKKPIPPEGESKEREIPTIISKELLSGPKEVLVPQASPSLRSVASDSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRLAEAQQKLLKVEEKESILQKRIDRAIQMHNSLEDRLQQLRNLPCAHKKPLSSAERQFKSELDHFKDVELDALHSSVDALNARLRRHLQASKASHQQQKTSGKKTYGGDDQISMLKSSLEKLSLVNNENSKKVKLVESTLRSKERSSRESSLPLL* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2105 793 MobiDBLite consensus disorder prediction 729 745 - -
Apr10g2105 793 MobiDBLite consensus disorder prediction 1 20 - -
Apr10g2105 793 Coils Coil 633 681 - -
Apr10g2105 793 MobiDBLite consensus disorder prediction 726 749 - -
Apr10g2105 793 Pfam Nuclear pore component 26 220 IPR019321 -
Apr10g2105 793 Pfam Nuclear pore component 440 774 IPR019321 -
Apr10g2105 793 PANTHER NUCLEOPORIN NUP84-RELATED 13 783 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Apr10g2105 793 MobiDBLite consensus disorder prediction 774 793 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2105 K14318 - gmx:100801853 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2105 10 33746832 33751651 Apr10g2105 10 33746832 33751651 ECH