Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2102 ATGGGAAGGTTGTTTGTGGTGAATCTGGAAGGGAAGATCTATAGCTGCAAACACTGTCGTACCCATCTTGCGCTTTACGAAGACATCGTCTCCAAGACTTTCCACTGCAGACATGGGAAAGCTTATCTCTTCAATAAGGTTGTGAATGTTTCTCTTGGCGAAAAAGAGGAGAGACTGATGATGACTGGGTTACATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTGGGTTGGAAATATGAGACTGCCCATGAAAAAGGCCAGAAGTACAAGGAAGGAAAGTCGGTGCTTGAACGGTACAAGGTGTCAGGTCCTGATGGAAGCAATTATTGGATCAACCATGAAGCACATGTTGGTGGAAGTGATGCTGATGATGCTTAG 390 0.4487 MGRLFVVNLEGKIYSCKHCRTHLALYEDIVSKTFHCRHGKAYLFNKVVNVSLGEKEERLMMTGLHTVADIFCVGCGSIVGWKYETAHEKGQKYKEGKSVLERYKVSGPDGSNYWINHEAHVGGSDADDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2102 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
Apr10g2102 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Apr10g2102 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Apr10g2102 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2102 Apr-Chr10 33723774 33726751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2102 - - cpap:110819345 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2102 10 33723774 33726751 Apr10g2102 10 33723774 33726751 ECH
Apr10g2102 10 33723774 33726751 Apr9g1418 9 23787917 23790656 PCT