Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2092 ATGGCGTCATCGCGTCCCCCTCCGTCGAAGTCAGTGGATGTGGACCTGACGATCGTGTCGGGGAAGCACCTCAAAAACGTGAACTGGAAAAACGGCGATCTCAAACCCTACGTCGTTTTCTGGGTAGACCCCGATCGGCGGCTGGCCACAAAATCCGACGACTCAGGCTCAACCTCCCCCGTCTGGAACGAGCGTTTCACTCTCCCTCTCCCTCTCCCACTCCACGACTCCTTCCTCACCCTCGAAATCTTCCATTCCAAACCCTCCGACACCCCCAAACCCCTCGTCGGCACCCTCCGTCTCCACCTCAAAGACCTCCCTGACCTCCACGACTCCTCCTCCCTCCGCAAATTCACCCTCTCTCGCCCCTCCGGTCGACCTCAGGGCAAGATCCACCTCAAACTCGGCCTCCTCCCTCGCCCCCAATCCTTCGATTACGTCTCCTTCAACCCTAACCCTAACCCTAATACTAACCCTAACCCTAATCCTCAATTCGTATGCTACAGAGGCTTCTCTCCTTCCCCTTCTCCTCCACCCTCGCCTTACACTTCTTACCCCGATTCTTACTCTGCTTACTATTCTGCTTACTATTCCGGTGCGCCGCCTCCTCCTCCTCCTCCAAGGCCTTTCTTTGACCGCCCCGTTTCTTATTCTGGGCCCACTGGGCCATCCGCCCCGCTTGACTATTCCTCCTCCTACGACCCCAAGCCCAAGGCTCCCAAAGTCGGCCTGGGTACTGGCCTCGCTGTTGGTGCTGTTGCTGGAGCTCTTGGCGGGCTTGCTCTGGAAGAGGGGCTTAAATATGAAGAGGACAAAATCGCGGAGAGGGTCGAGAACGACGTCGATGTTGGGCGAGAGGATTACCGCGATTACTGCGTAGATTATTGA 888 0.5709 MASSRPPPSKSVDVDLTIVSGKHLKNVNWKNGDLKPYVVFWVDPDRRLATKSDDSGSTSPVWNERFTLPLPLPLHDSFLTLEIFHSKPSDTPKPLVGTLRLHLKDLPDLHDSSSLRKFTLSRPSGRPQGKIHLKLGLLPRPQSFDYVSFNPNPNPNTNPNPNPQFVCYRGFSPSPSPPPSPYTSYPDSYSAYYSAYYSGAPPPPPPPRPFFDRPVSYSGPTGPSAPLDYSSSYDPKPKAPKVGLGTGLAVGAVAGALGGLALEEGLKYEEDKIAERVENDVDVGREDYRDYCVDY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2092 295 ProSiteProfiles C2 domain profile. 1 117 IPR000008 -
Apr10g2092 295 MobiDBLite consensus disorder prediction 204 234 - -
Apr10g2092 295 MobiDBLite consensus disorder prediction 146 183 - -
Apr10g2092 295 Pfam C2 domain 14 109 IPR000008 -
Apr10g2092 295 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Apr10g2092 295 Gene3D C2 domain 11 152 IPR035892 -
Apr10g2092 295 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 140 IPR035892 -
Apr10g2092 295 PANTHER INGRESSION PROTEIN FIC1 8 290 - -
Apr10g2092 295 SMART C2_3c 13 115 IPR000008 -
Apr10g2092 295 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2092 Apr-Chr10 33636295 33637738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2092 - - gmx:102666594 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2092 10 33636295 33637738 Apr10g2092 10 33636295 33637738 ECH