Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2085 ATGTCCAATCCAACTTCAAAAGCCACTTGGACACCTGCATTCCATAAAATATTTGTTAATTTGTGCCTTGAAGAAACGTTGAGGAATGAGCCTGGGACACGAATTACCAAGGTGGGTTGGAGGAACATTGTTGGATCCTTTTATGCGAAGACTGGTGTGAGATATGACAAAAAGCAATTTAAGAATCACTATGATTCTACCAGAAAGCTATGGAAAGTCTGGGTCAAGTTGACTGGTGATAGTAGCATGAAATGGGATCTGGAAACACGGACTTTTGGTGCTTCGGAGGAAGACTGGCGCAATTATGTAAAGGAAATCCCAGAAGCTGCACAATTTCAGTTTAAGGAAATCCTGTTCAAAGACAAGCTGGATATCATCTTTGATGGAGGACATCAAATTGAGGAAATGAAACGATTAGCAAGTCTTAAGTTGCAGAATGGTGCTTCAGCTGCATCTCCTTTGCGTGGCAAAGAGCGAGAGAAGAAACGTAAGAATGTTTGTAGGGAATGGGATTGCCAATTAAATAGTGCCATTATGGTTGACTATATGCCAACTCCAAAAGCTACTTGGACACCTACGTACCATAAAATATTTATTGATTTATGCATCGAAGAAACATTGAAGGGGAACAAGTCTGGGACACATTTTACCAAAGAGGGCTGGAGGAATATTGTTCTATCCTTTAATGCAAAGAGTGGTATGAGATATGACAAAAAACAAATTAAGAATCACTATGATTCAACCAGAAAACTATGGAAAATCTGGGTTAAGTTGGTTGGTGATGATAGCATGAAATGGGATCCAGAAACCAGTAAGTTTGGCGCTTCAGAGGAAGACTGGTGCAATTGTATAAAGGCATTCCCTGAAGCTGCACAGTTTCGGTTTAAGAAAGTCCAGTTTTCTGACAAACTAAACATCATCTTTGATGGAGGCATACCAACTGGGGAAATGGTAACTCCGAGTAGGCTTAAGAGGCAGAAAGATGCTTTGCTTACATCATGTGGAAAAGACCAAGAGAGGAAACGCAAGAATGTTGGCAGGGATTGTGAATTGAAGAGTGCCATTATGGTTAATGCTATCCCAATCAGTACGATTCCAAGTGAGCAAAGCATGTCCAGTTCATCACTTACTAAGGTCAAAGCCACATGGACCCTTTCAGTGCACAAGATCTTCGTTGATCTATGTCTGCAAGAGACATTAAAGGGGAATAAGCCTGGGACACATTTTACCAAGGAAGGTTGGAAGAATATTATGGATTCATTTTATGTGAAATCTGGTTTGAATTATGATAGATTACAACTTAAGAATCACTGGGATTCTACCAAGGAACAATGGAAAATTTGGTGTAAGCTAATAGGCACAAGTAACATGAAGTGGGATCCATATAACCAGAAATTTGAGGCTAGTGAAGAAGATTGGACCAACTATTTACAGGAAAACCCAGAAGCTGCACAATTTCGCTATAAGGAACTACAGTTCACTGACATATTGGAAACCATCTTTAATGGAACTACTGTTACAGGGGAGACTGAACCTGCTGTGCAACAAAGGAAAAGTGATGATAGTGTTGTTACTTTCCCTTTGCATGCAAAAGAGCCTGACACAGTCATCGCAGATGAGAAAACTGAATGTCTTTGTGATGCTGTTGCATCAAGAAATGGTGTGAATATTCAAAAGAATGCTATTGCAATTTCATCCACCGAAGGAAAATGGAATTATAGTATCGGTGAATGCATAGAATGCCTAGATAGAATGGAAGAAATAGAGCAAGGAAGTGATATGTACATGTTTGCTTTAGATTTATTCCTTAAGCAGGAATATAGGGAAATTTTTCTGCAATTGAAGAAGCCAAATCTGAGGATCTCATGGTTGCAGCGGCTTCAGTCTTTTGGTCCACCTTTACTCTAG 1908 0.3968 MSNPTSKATWTPAFHKIFVNLCLEETLRNEPGTRITKVGWRNIVGSFYAKTGVRYDKKQFKNHYDSTRKLWKVWVKLTGDSSMKWDLETRTFGASEEDWRNYVKEIPEAAQFQFKEILFKDKLDIIFDGGHQIEEMKRLASLKLQNGASAASPLRGKEREKKRKNVCREWDCQLNSAIMVDYMPTPKATWTPTYHKIFIDLCIEETLKGNKSGTHFTKEGWRNIVLSFNAKSGMRYDKKQIKNHYDSTRKLWKIWVKLVGDDSMKWDPETSKFGASEEDWCNCIKAFPEAAQFRFKKVQFSDKLNIIFDGGIPTGEMVTPSRLKRQKDALLTSCGKDQERKRKNVGRDCELKSAIMVNAIPISTIPSEQSMSSSSLTKVKATWTLSVHKIFVDLCLQETLKGNKPGTHFTKEGWKNIMDSFYVKSGLNYDRLQLKNHWDSTKEQWKIWCKLIGTSNMKWDPYNQKFEASEEDWTNYLQENPEAAQFRYKELQFTDILETIFNGTTVTGETEPAVQQRKSDDSVVTFPLHAKEPDTVIADEKTECLCDAVASRNGVNIQKNAIAISSTEGKWNYSIGECIECLDRMEEIEQGSDMYMFALDLFLKQEYREIFLQLKKPNLRISWLQRLQSFGPPLL* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2085 635 Pfam Myb/SANT-like DNA-binding domain 9 102 IPR024752 -
Apr10g2085 635 Pfam Myb/SANT-like DNA-binding domain 189 282 IPR024752 -
Apr10g2085 635 Pfam Myb/SANT-like DNA-binding domain 382 476 IPR024752 -
Apr10g2085 635 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 312 633 - -
Apr10g2085 635 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 2 176 - -
Apr10g2085 635 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 185 312 - -
Apr10g2085 635 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 312 633 IPR045026 -
Apr10g2085 635 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 2 176 IPR045026 -
Apr10g2085 635 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 185 312 IPR045026 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2085 Apr-Chr10 33599903 33602938 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2085 - - gmx:100793529 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2085 10 33599903 33602938 Apr10g2085 10 33599903 33602938 ECH