Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2079 ATGGGTAGAGGAGACATTGAACTCAACTCAAATAAGCACTATGACCACGATGCCGGGGACGCTGAACTCCCAGACACCGCACATCAGATTAGTAGTGATTCATGGTTTCAAGTGGCTTTTGTGCTTACCACCGGAATAAACAGCGCCTATGTGCTTGGATATCCCGGGACAGTCATGGTTCCCCTGGGTTGGATTGGGGGTGTGATTGGTCTAATTCTTGCTACTGTAGCATCACTCTATGCAAATTCTCTAATTGCTAAACTCCATGAATATGGAGGGACAAGGCGCATTAGATATAGGGATCTTGCAGGAGCTATATATGGTAAGAAAGCGTATTCTCTCACCTGGGGTATGCAGTATGTCAATCTTTTCATGATAAATACTGGTTACATCATTCTGGCCGGTTCAGCCTTGAAAGCTACGTATGTTCTGTTTAGGGATGATGGAATGCTGAAGCTTCCATATTGTATAGCCATAGGTGGAGTTGTCTGTGCAATGTTTGCCATTTGTATTCCTCACCTCTCAGCTCTTGGAGTTTGGCTGGGATTTTCAACAGTTTTCAGCTTAGTATATATTATTATAGCATTTGTGCTGTCGCTTAAAGATGGACTACATTCACCAGCTCGAGATTACAGCATTCCGGGAAGTGGTGCAAGTAAAGTATTTTCAACAATTGGAGCGTGTGCCAATCTTGTGTTCGCATATAATACTGGCATGCTTCCTGAGATACAGGCAACGATTAAGCAGCCAGTTGTGAAGAACATGATGAAAGCCCTGTACTTTCAGTTCACCCTTGGGGTTCTACCATTGTACCTGATTGCCTTTATAGGATACTGGGCTTATGGATCTTCCACAGCTGTGTATTTACTGAATAGTGTAAATGGTCCAGTCTGGGTGAAGGCCTTGGCCAACATTACAGCTTTTCTTCAATCAGTCATTGCATTGCATATATTTGCGAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGCGCACTGAATATTAGAAACTTGTCGTTTCGAATCGTGGTAAGAGGTGGTTACCTGGCCTTCAATACATTTGTGTCCGCCTTCCTGCCATTCCTTGGAGATTTCATGAGCCTCACAGGGGCTATGAGCACATTTCCCCTTACATTTATTCTTGCAAATCACATGTACCTTATGGCAAAGAAGGAAAAACTGACATTCTTACAAAAGTCCTGGCACTGGCTCAACATTTGTTTCTTTGGCATGCTGTCTTTTGCAGCAACAGTTTCAGCCTTACGGCTCATAGCCGTAGACTCCAAAACATACCATGTTTTTGCTGACTTGTGA 1326 0.4321 MGRGDIELNSNKHYDHDAGDAELPDTAHQISSDSWFQVAFVLTTGINSAYVLGYPGTVMVPLGWIGGVIGLILATVASLYANSLIAKLHEYGGTRRIRYRDLAGAIYGKKAYSLTWGMQYVNLFMINTGYIILAGSALKATYVLFRDDGMLKLPYCIAIGGVVCAMFAICIPHLSALGVWLGFSTVFSLVYIIIAFVLSLKDGLHSPARDYSIPGSGASKVFSTIGACANLVFAYNTGMLPEIQATIKQPVVKNMMKALYFQFTLGVLPLYLIAFIGYWAYGSSTAVYLLNSVNGPVWVKALANITAFLQSVIALHIFASPMYEFLDTKYGIKGSALNIRNLSFRIVVRGGYLAFNTFVSAFLPFLGDFMSLTGAMSTFPLTFILANHMYLMAKKEKLTFLQKSWHWLNICFFGMLSFAATVSALRLIAVDSKTYHVFADL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2079 441 PANTHER OS05G0424000 PROTEIN-RELATED 16 436 - -
Apr10g2079 441 PANTHER PROLINE TRANSPORTER 1 16 436 - -
Apr10g2079 441 Pfam Transmembrane amino acid transporter protein 33 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2079 Apr-Chr10 33570888 33574209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2079 59 441 Organic Solute Cotransporters AT3G55740 74.413 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2079 - - gmx:100778997 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2079 10 33570888 33574209 Apr10g2079 10 33570888 33574209 ECH
Apr10g2079 10 33570888 33574209 Apr9g1390 9 23549598 23552837 PCT