Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2073 ATGGCTAAACCCCTCTCTGGCGCAGACCACCGCCTTCTGCCGCACTTCCTCTCTGACGCCGATTTGGCCTTCCCCTCTGAGTTCCCTTACGAGTTCGGCGTCTCTTCTCCGGCGGTGGAGTCGGTGGCGGGCTCCACCGAGACAGAGAGCAGCGACGAGGAAGAGGACTTCTTCGCGGGTCTGAATCGGCGACTCAGTCAGTCATCGCTTCACGAAACTCGGAAGCAGCTCGTCGCTGTACCCATCAAAGCCGAAACCGCCGACACACTTACTAAGATTTCGGCAAAGGCTTTGGGTTTGGCACTGTCGCCTCAGTCAACGCTGAGTGGAATCGGAAGCTGGTCAGGTAGGAGCGGCGTCTCCGGCGACGGAAGTCCAAACGGGTTCTCTCGCGTACCCTCGCCCTCGACGACGTCGTTTTGTGAAAGCGACCCCTGGGAAGTTATCTACGCAGCTGCCGGACAAGTGGCAAGGTTGAAGATAAACAACCAAGTTTCACAGTTCGATTTCCAGAACAATAGAGGCTTATTAAGCCAAGTTCGCACTAACCAGAGCTTCAACCAGGTTCAGCAACCTATGAGACAGAAGCAACAGGGTGGTTCGGTTTGGGGGAAACAAGTTAACCCGAACCGTTTGGTGGCTCAGCAGCAACAACTACATGTTCAGAACGGAGGGCGTGAGTATGGTTATGAGAGCGTGAAATGCACGCGTTCTTTGTCTTCTCCTCATTCTGCGTGGCCTTCTGTGCAACTTCAGCAACAAAACAATCGGGTACAGTATAACGGATCCGGTTCACGGGTTGGAGTTCCGGGTAGGCCTTCTGTGAAAAAAGGGTGTGGCGGAACTGGAGTGTTCTTGCCTCGCCATTATGACACTCCTTCTGAGCCTCGCATGAAAACTGGTTGTGCTCCTGTTCTGTTACCGGCTAAGGTGGTTCATGCTTTGAACGCCGCTTCTCAAACGCACTTCTCCAATGCCTTACCTACGGATTATGATGCCTTGTTAGCAAGGAGAAACGCGCTTCTCATGCAGCAGAGGCTAAGCGTGCGGCGGGAAGAGCCAACAAACTACGAAATTCGCCTACCTCAAGAGTGGACTTACTGA 1104 0.5362 MAKPLSGADHRLLPHFLSDADLAFPSEFPYEFGVSSPAVESVAGSTETESSDEEEDFFAGLNRRLSQSSLHETRKQLVAVPIKAETADTLTKISAKALGLALSPQSTLSGIGSWSGRSGVSGDGSPNGFSRVPSPSTTSFCESDPWEVIYAAAGQVARLKINNQVSQFDFQNNRGLLSQVRTNQSFNQVQQPMRQKQQGGSVWGKQVNPNRLVAQQQQLHVQNGGREYGYESVKCTRSLSSPHSAWPSVQLQQQNNRVQYNGSGSRVGVPGRPSVKKGCGGTGVFLPRHYDTPSEPRMKTGCAPVLLPAKVVHALNAASQTHFSNALPTDYDALLARRNALLMQQRLSVRREEPTNYEIRLPQEWTY* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2073 367 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 18 367 - -
Apr10g2073 367 MobiDBLite consensus disorder prediction 113 137 - -
Apr10g2073 367 PANTHER TIP41-LIKE PROTEIN 18 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2073 Apr-Chr10 33512655 33514198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2073 - - vra:106757577 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1382 9 23490017 23492367 Apr10g2073 10 33512655 33514198 ECH
Apr4g1959 4 27995416 27998061 Apr10g2073 10 33512655 33514198 ECH
Apr10g0656 10 16039692 16042023 Apr10g2073 10 33512655 33514198 ECH
Apr10g2073 10 33512655 33514198 Apr10g2073 10 33512655 33514198 ECH
Apr10g2073 10 33512655 33514198 Apr9g1382 9 23490017 23492367 PCT