Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2071 ATGGATGCTTTATCCAAGAAGAACGAAGATTCTCTAAAGAAAAGAGATGGGTCTCGGCCTAGTGTCACCGATTCCAGTGCAGAGTCTAGGGAAACCAGTTTCAGTGGATCCAGTTCTTCAGTTTCTGCTGAAGAAGTAAAGCAAAAAGGGTCTTCTTCTCCTTCTCCTCTTGGTTGGCCTATTCTCAAGGCTAAAGTTTCCAAATGCTCAAATTCTGATGAAAAAGAAAATAAACATAAATCCCACTTGGAAGACACAAAATTTACCTCTATCCATTTAAAATTGTCAGAAGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGTGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGTACTGCTTTGGCCATATCAAACGCCATTACTAATCTGTGTGCCACTGTATTTGGGCAATTATGGAGACTAGAACCTCTACCTTCTGAGAAGAAAGAAATGTGGCAGAGAGAGATGGAATGGCTTGTTTGCGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCTGATGGGAGTAAGCTTGAGGTAATGACTTGCAGGCCTAGGACAGATATTTTTATCAATCTTCCAGCTCTACGCAAACTTGACAACATGCTTCTCGAAATTTTAGACAGTTTCACCACTACAGAGTTTTGGTATATTGATCAAGGAATTGTAGCCCCAGATGCAGATGGTTCGGCCTCTTTTCGCAGAACAATTCAGCGGCAAGAAGAGAAGTGGTGGCTTCCTGTACCCCGTGTACCCCCTGCAGGTCTCAGTGAGGACTCAAGAAAGCAGTTGAATCACTCTCGAGAATGTGCAAACCAAATTCTAAAAGCAGCAATGGCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCAGAATCATATTTAGAGCTCCTTCCTAAGAATGGAAGAACTTGCCTAGGGGATTTTGTTTACCGTTACATCACATCAGATCAATTTTCTCCAGAGTTCTTACTTGATTGCTTAGACATCTCCTCAGAACATGTTGCACTAGAGATTGCTAACCGCGTGGAAGCAGCAATTTATGTATGGCGTCGAAGAGCTCACTCTAAGCCCTCACCTAGTCCCAACCGTTCTACTACTAAATCATCATGGGAAATAGTCAAGGACTTTATGATTGATGGAGATAAGAGAGAACTGCTAGCAGATAGAGCTGAAAACATTCTACTTTCCTTGAAGCAACGGTTCCCAGGCTTAAGTCAAACCACCCTTGACACTAGCAAGATCCAGTGCAACAAGGATGTTGGAAAATCCGTGCTAGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCTTCTAACATTGTAGCCCGTATAGATGATTTGCTATATGTGGATGACTTGACCAAACATTCGGAGAGGTTTGCATTGGTTCCTACTACAGTTAACGTGGTTTCTCAGCAGAAGAAGGTTACCCGTCCACTCTCCTCAGTGTCTGTCTCAGGCACTACTCCACACAAAGGAGGATTAGGCACACCTAGCTTTTCACCTGTGCCACTAATTAGTCCTGCACGAGGGGAGAGAACCCCTTTTCTCCACAACAATAACAACGGCATCAAACCTCATCGTCGTGGCTTTGGGGTGAGGAGAGTGTTATCAAATTATCTTGGAGTAGAGACAAAGTCAAAGATATGCGGCAACTCAAATGAGGTTAATTGTTCACACCCAGAACAACGTTTGAAGGAATCATGTGCCCTCAAAAACAAGACCAAATGA 1758 0.4278 MDALSKKNEDSLKKRDGSRPSVTDSSAESRETSFSGSSSSVSAEEVKQKGSSSPSPLGWPILKAKVSKCSNSDEKENKHKSHLEDTKFTSIHLKLSEVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATVFGQLWRLEPLPSEKKEMWQREMEWLVCVSDHIVELIPSWQTFPDGSKLEVMTCRPRTDIFINLPALRKLDNMLLEILDSFTTTEFWYIDQGIVAPDADGSASFRRTIQRQEEKWWLPVPRVPPAGLSEDSRKQLNHSRECANQILKAAMAINSIALAEMEVPESYLELLPKNGRTCLGDFVYRYITSDQFSPEFLLDCLDISSEHVALEIANRVEAAIYVWRRRAHSKPSPSPNRSTTKSSWEIVKDFMIDGDKRELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSVLESYSRVLESMASNIVARIDDLLYVDDLTKHSERFALVPTTVNVVSQQKKVTRPLSSVSVSGTTPHKGGLGTPSFSPVPLISPARGERTPFLHNNNNGIKPHRRGFGVRRVLSNYLGVETKSKICGNSNEVNCSHPEQRLKESCALKNKTK* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2071 585 MobiDBLite consensus disorder prediction 490 512 - -
Apr10g2071 585 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 464 IPR005512 GO:0005085
Apr10g2071 585 Gene3D PRONE domain, subdomain 1 91 330 - -
Apr10g2071 585 Gene3D PRONE domain, subdomain 1 331 470 - -
Apr10g2071 585 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 16 562 - -
Apr10g2071 585 MobiDBLite consensus disorder prediction 1 21 - -
Apr10g2071 585 MobiDBLite consensus disorder prediction 22 55 - -
Apr10g2071 585 ProSiteProfiles PRONE domain profile. 88 470 IPR005512 GO:0005085
Apr10g2071 585 MobiDBLite consensus disorder prediction 490 504 - -
Apr10g2071 585 MobiDBLite consensus disorder prediction 1 59 - -
Apr10g2071 585 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 16 562 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2071 Apr-Chr10 33485173 33488043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2071 - - gmx:100796692 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1381 9 23465258 23468216 Apr10g2071 10 33485173 33488043 ECH
Apr10g2071 10 33485173 33488043 Apr10g2071 10 33485173 33488043 ECH
Apr10g2071 10 33485173 33488043 Apr9g1381 9 23465258 23468216 PCT