Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2061 ATGGAGGAGGAATCCTACACCACCCCCACCAGCACCAGTCATTTGCTTGGTTCTGTTCCCGCTGTTATTGCTGAAGAAAAGAACACCTCAAATCATGACGTCCCTTATGCAAGTATGCAAACATTCCCTCCCAGCAATGGAGGAGACAGAGGAAGGGGATATCAAACTCTTGAAAATCCAACAGAAACATTTGAGCAACAGCCAACAAACAACTGGCAGGGAGTATTTAGTGTCTCATCTTACAAACAGTATTTCAACGTGGATACAGATGTTGTCGTAAACAGATTGATAAGTTCATTGAATCCAGCTGGTGGTGATTTTTTTAATAAGATAGATGCTAACCCTGATTTGTATGGGCTTATATGGATCTCAACAACATTGGTTTTCGTACTTACCTTACTTGGAAATCTAGCTACATATCTTATGCAAAAGCATGCAGATAACAGCAGTTCTTGGAGTTTTGATGTTAGCTATGTCAACACAGCTGCATGGTCTATCTATGGCTATGTCATAGTCGTCCCAATGGCATACTTCTTTTTCCTCCAGTATATGGGTTCAAATGCAAACCTTGTACGGTTTTGGTGCATGTGGGGGTATTCGCTCACCATTTTCATCTTGTCCTGTTTTCTATTACTTATTCCAGTTGAGTTTCTTCGTTGGATTATAATAATCCTTACGGGTGGTGCCTCAGCTAGTTTTGTTGCCTTGAACTTAAGGTCTGTTATAGATGGAAATGATCTTTCAGTGGCTGTAATTGCTGCATTTTTCTTGCAAATAGCTTTGTCTGTCTTCATCAAGGTTTGGTTCTTTGCATAA 816 0.4032 MEEESYTTPTSTSHLLGSVPAVIAEEKNTSNHDVPYASMQTFPPSNGGDRGRGYQTLENPTETFEQQPTNNWQGVFSVSSYKQYFNVDTDVVVNRLISSLNPAGGDFFNKIDANPDLYGLIWISTTLVFVLTLLGNLATYLMQKHADNSSSWSFDVSYVNTAAWSIYGYVIVVPMAYFFFLQYMGSNANLVRFWCMWGYSLTIFILSCFLLLIPVEFLRWIIIILTGGASASFVALNLRSVIDGNDLSVAVIAAFFLQIALSVFIKVWFFA* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2061 271 Pfam Yip1 domain 101 265 IPR006977 GO:0016020
Apr10g2061 271 PANTHER UNCHARACTERIZED 3 271 IPR039765 GO:0005794|GO:0016192|GO:0031267
Apr10g2061 271 PANTHER PROTEIN YIPF 3 271 - -
Apr10g2061 271 MobiDBLite consensus disorder prediction 33 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2061 Apr-Chr10 33384921 33388763 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2061 K22940 - gmx:100813483 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2061 10 33384921 33388763 Apr10g2061 10 33384921 33388763 ECH
Apr10g2061 10 33384921 33388763 Apr9g1365 9 23277279 23281670 PCT