Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2054 ATGACCGAATTGGAGGAACGGATGGGGGATTTCAAGCCCTTCTCGGAGGGGTCGTCGTGCTCGCGATCAATTAGCGAGACGATGAATGGGTCGCACCAATTCACGATAAAGGGGTATTCTTTGGCCAAAGGGATGGGTGCGGGGAAGTACATCATGAGCGATACCTTCAGCGTTGGTGGCTTCGATTGGGCTATCTATTTCTACCCTGATGGCAAGAACCCTGAGGATAATTCCATGTATGTTTCTGTTTTCATAGCTCTTGCCAGCGATGGAACTGATGTTAGGGCTTTGTTCAAGTTGACGTTGGTGGATCAGAGTGAAAAGGGTAATGATAAAGTTCATAGCCATTTCGATCGCCCTCTTGAGAGTGGACCTTATACCTTGAAGTATAGAGGCAGCATGTGGGGTTACAAGCGTTTCTTCAGAAGAACACTATTGGAAAATTCAGAGTATCTAAAGGATGATTGCCTCATCATGCATTGCACTGTTGGTGTTGTCAAAACTCGTTTTGAGGGATCTAAACAAGGTGTTATTGTGCCACAGTCAGACATGGGCCAAGATTTTAAGGACCTGTTGGAATCTGAGGTTGGATGTGACATAGTTTTCAAGCTCAAAAATGAAAGTTTCAAAGCTCACAAGTTGATACTTGCTGCCCGATCTCCAGTGTTTAGAGCGCAGTTTTATGGACTTGTTGGGGATCCTAGCTTAGAGGAAGTAGTGGTAGAGGATATTGAGCCCTTTATCTTCAAGGCAATGCTTCTCTTCATTTACTCTGACAAACTTCCTGACATCTATGAGGTTATGGACTCGATACCCATGTGCTCATATACTGTCATGGTGCAGCATCTCTTGGCTGCTGCCGATCTCTATAATCTTGATCGGCTAAAATTGTTATGTGAATCAAAATTGTGTGAAGAACTCAATACTGACAATGTGGCCACCACACTTGCCCTGGCTGAGCAACACCACTGTCCACAGCTTAAGTCAATCTGTTTAAAATTTATTGCAAATCCAACAAACTTGGGAGGTGCAAAAGAAAATAGCTTATTGGTTTAG 1056 0.4384 MTELEERMGDFKPFSEGSSCSRSISETMNGSHQFTIKGYSLAKGMGAGKYIMSDTFSVGGFDWAIYFYPDGKNPEDNSMYVSVFIALASDGTDVRALFKLTLVDQSEKGNDKVHSHFDRPLESGPYTLKYRGSMWGYKRFFRRTLLENSEYLKDDCLIMHCTVGVVKTRFEGSKQGVIVPQSDMGQDFKDLLESEVGCDIVFKLKNESFKAHKLILAARSPVFRAQFYGLVGDPSLEEVVVEDIEPFIFKAMLLFIYSDKLPDIYEVMDSIPMCSYTVMVQHLLAAADLYNLDRLKLLCESKLCEELNTDNVATTLALAEQHHCPQLKSICLKFIANPTNLGGAKENSLLV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2054 351 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 17 343 - -
Apr10g2054 351 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 17 343 IPR045005 GO:0016567
Apr10g2054 351 Gene3D - 302 343 - -
Apr10g2054 351 ProSiteProfiles MATH/TRAF domain profile. 29 163 IPR002083 GO:0005515
Apr10g2054 351 SMART BTB_4 198 307 IPR000210 GO:0005515
Apr10g2054 351 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 28 168 IPR008974 GO:0005515
Apr10g2054 351 CDD MATH 30 163 IPR002083 GO:0005515
Apr10g2054 351 CDD BTB_POZ_BPM_plant 184 304 - -
Apr10g2054 351 Pfam BTB/POZ domain 188 306 IPR000210 GO:0005515
Apr10g2054 351 Gene3D Potassium Channel Kv1.1; Chain A 174 301 IPR011333 -
Apr10g2054 351 MobiDBLite consensus disorder prediction 1 26 - -
Apr10g2054 351 ProSiteProfiles BTB domain profile. 198 261 IPR000210 GO:0005515
Apr10g2054 351 SUPERFAMILY TRAF domain-like 26 165 - -
Apr10g2054 351 SUPERFAMILY POZ domain 180 305 IPR011333 -
Apr10g2054 351 SMART math_3 34 146 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2054 Apr-Chr10 33337382 33342930 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2054 K10523 - gmx:100786636 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2054 10 33337382 33342930 Apr10g2054 10 33337382 33342930 ECH