Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2053 ATGAAATCCCCAACCAATGGCGATTTCTTCAGATCAACCCTCACACTCAAGATCGCCGCTTTCTTCTTCATCGCCGTCACGTTCTTCTACTTCGGCAAGCATTGGTCCGATGGGTACCAGCAACTCGTATTCTTCACCCAAGGCACCCACCCGGATCCGGATCCGAACCCGAGTGTGTCAACGTCCCCGAATTACAACAAATTCTTCAATGTCTCTGCTCTCATTGACCAGAACCTTCCACAGCCGGCGCCGGAAAAAATCCTAGCGCCACCGCCGGCGGAATCGATCGAGAAACTGGGGATCGTGAACGAGAATGGCACGATGTCCGATGAGTTCGAGGTGGGTGATTGGGTGAACGAGACTGAGATTGAGAAGTTGGGTGCTTCTTCTTCTTTTGATGACGATGATGATTTCAAATTCGTGATCAAGAGGTTTGGGTTGTGCCCGCGCAACATGAGCGAGTATATTCCGTGTTTGGATAACGAGGACGCGATTCGGAAGCTGCCTTCCACGGAGAAAGGGGAAAGGTTCGAGCGGCATTGCCCTGAACAAGGTCGAGGGTTGAATTGCTTGGTTCCTGCTCCCAATGGGTACCGTACCCCAATTCCATGGCCCAGAAGCCGAGATGAGGTATGGTACAATAATGTGCCTCATACACGTCTGGTTGAAGATAAGGGAGGCCAAAACTGGATTTCCAGAGACAAAGATAAGTTTAAATTTCCAGGAGGTGGTACGCAGTTTATTCATGGGGCAAATGAATACTTGGACCATATTGCTAAGATGATTCCCGAAATTACATTTGGTCGGCATATACGAGTTGTTCTTGATGTGGGCTGTGGCGTTGCTAGTTTTGGGGCGTACTTACTGTCTCGGAATGTCATCACCATGTCTGTTGCTCCCAAAGACGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGGGTACCGGCCATGGCAGCCGCATTTGCAACTAGACGTTTGTTATATCCAAGTCAAGCTTTTGACTTGATACATTGTTCACGGTGTAGAATTAATTGGACTCGAGATGATGGGATACTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTACTTTGTCTGGGCTGCACAGCCAGTTTATAAGCATGAGGAAGTTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTGTGCTGGAAGTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCTTCTGACAATAGCTGCTATCAAGACCGGGAAGCTGGAACTAAACCTCCCCTATGTGACCCAAGTGATGACCCGGACAATGTTTGGTATGTTAATCTAAAAGCATGCATCTCTGAATTGCCTAAGAATGGATATGGAGCAAATGTTACTGAATGGCCTGCACGTTTGCAAACCCCACCTGATAGGCTTCAAAGCATAAAACTTGATGCTTTCATATCCCGAAAAGAGCTCTTTAAAGCAGAATCAAGATACTGGAATGATATTATAGCAAGCTATGTCCGTGCCTTACACTGGAACAAGATGCGATTAAGAAATGCTATGGACATGCGAGCAGGATTTGGAGGATTTGCGGCAGCTTTGATTGATAAGAATCTTGACAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGCCCAAACACCTTGCCTGTTATATATGACCGCGGACTGATTGGAGTGATGCATGACTGGTGTGAGCCATTTGACACCTACCCAAGAACATATGATTTACTGCATGCAGCAAACCTGCTTTCTGTTGAGAGGAAAAGATGCAACGTCTCATCAATTATGCTTGAGATGGATCGGATACTAAGACCTGGTGGACGTGTATACATACGTGACTCTCTCGCCATCATGGATGAACTTCAAGAGATTGCCAAGGCAATAGGCTGGCAAGTGATGTTGAGAGACACAGCTGAGGGTCCTCATGCAAGTTATAGGATATTGGTTTGTGATAAGCATCTGCTACGCACTTGA 1989 0.4635 MKSPTNGDFFRSTLTLKIAAFFFIAVTFFYFGKHWSDGYQQLVFFTQGTHPDPDPNPSVSTSPNYNKFFNVSALIDQNLPQPAPEKILAPPPAESIEKLGIVNENGTMSDEFEVGDWVNETEIEKLGASSSFDDDDDFKFVIKRFGLCPRNMSEYIPCLDNEDAIRKLPSTEKGERFERHCPEQGRGLNCLVPAPNGYRTPIPWPRSRDEVWYNNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHIAKMIPEITFGRHIRVVLDVGCGVASFGAYLLSRNVITMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWKFLKKDGYIAVWQKPSDNSCYQDREAGTKPPLCDPSDDPDNVWYVNLKACISELPKNGYGANVTEWPARLQTPPDRLQSIKLDAFISRKELFKAESRYWNDIIASYVRALHWNKMRLRNAMDMRAGFGGFAAALIDKNLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAANLLSVERKRCNVSSIMLEMDRILRPGGRVYIRDSLAIMDELQEIAKAIGWQVMLRDTAEGPHASYRILVCDKHLLRT* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2053 662 PANTHER METHYLTRANSFERASE PMT12-RELATED 13 660 - -
Apr10g2053 662 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 495 637 IPR029063 -
Apr10g2053 662 Gene3D Vaccinia Virus protein VP39 250 418 IPR029063 -
Apr10g2053 662 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 660 IPR004159 GO:0008168
Apr10g2053 662 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 178 392 IPR029063 -
Apr10g2053 662 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 154 657 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2053 Apr-Chr10 33330577 33335923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2053 - - gmx:100800414 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2053 10 33330577 33335923 Apr10g2053 10 33330577 33335923 ECH
Apr10g2053 10 33330577 33335923 Apr9g1360 9 23232718 23237425 PCT