Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2052 ATGAATACACGTAGTATGTTGGATATTGTTTTAAGTGATATACTTCAGGTGGTCACTCCCTTACAAGAAGATTGGGAGATACGGTTTGCAATTATTAATGATCTGCGAAGTGTTATTGAATCTGTGGAAAGCCTGAGAGGTGGAGGGAGCAACTTGCAGTTCATCTCCAATGCACGAGTTCCCATTTTAAAATTTAAAAGCAACCGGCAGGGTATATCTTGTGATATTTCAATCAATAATCTTCCGGGCCAAATGAAATCAAAGATTTTGCTTTGGATCAACAGGATAGATGGCCGCTTTCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAGCTGGAACTTTCAACTCCTATTCCCTCAGTTTACTTGTAATCTTTCACTTTCAGACGTGTGTTCCTGCAATTTTACCACCACTTAAAGATATATACCCTGGCAATATGGTTGATGATCTTAGAGGTGTCAGAGCTGACGCAGAAAATCTTATTGCAGAAACATGTGATGCTAATATAAATCAGTTCATATCAGTCAAGTCAAGGCCAATTAACAGAAAATCTTTGCCTGAACTTTTTGTTGAATTCCTAAGAAAGTTTGCTCAGATGGTTTCATGGGCCTCAGAGCTGGGACTTTCCCCACATACTGGACAATGGGAGCAGATAAAGAACAACATGAGATGGTTACCCAAGACTTATGCAATATTCGTAGAGGATCCTTTTGAGCAGCCACAAAATACTGCCAGATCTGTCAGCACAGGACAAATGAAAAAGATAACTGAGGCATTTTTAAGGACATACAGCTTACTTACCTCAAAAAATCAAAATCAAGTTTCACTTTTGACCAACTTAGCTTCACCACAAGTATCAAGATTTAACACAAAACCTGTTGTTATCCGAAATTACAGTGGCAGTTACTTTCCCCCAACCCAGCCACAAGTGCAGAGAGTTATTCGCCCACGATTACAGTCACGTCATTTTCAAAATGCCAATAATCAAGAAACAAGCTCCAACAGTTCATCTTCAAAAGGACATGTACAGGTGCATAAAGGCCATCAGATGTGGAGGCCAAAGATTCAAAAGCAAACTCTATTACCCTAA 1119 0.3914 MNTRSMLDIVLSDILQVVTPLQEDWEIRFAIINDLRSVIESVESLRGGGSNLQFISNARVPILKFKSNRQGISCDISINNLPGQMKSKILLWINRIDGRFHDMVLLVKEWAKAHKINNSKAGTFNSYSLSLLVIFHFQTCVPAILPPLKDIYPGNMVDDLRGVRADAENLIAETCDANINQFISVKSRPINRKSLPELFVEFLRKFAQMVSWASELGLSPHTGQWEQIKNNMRWLPKTYAIFVEDPFEQPQNTARSVSTGQMKKITEAFLRTYSLLTSKNQNQVSLLTNLASPQVSRFNTKPVVIRNYSGSYFPPTQPQVQRVIRPRLQSRHFQNANNQETSSNSSSSKGHVQVHKGHQMWRPKIQKQTLLP* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2052 372 Gene3D Beta Polymerase, domain 2 38 96 IPR043519 -
Apr10g2052 372 MobiDBLite consensus disorder prediction 336 372 - -
Apr10g2052 372 Gene3D - 97 274 - -
Apr10g2052 372 SUPERFAMILY PAP/OAS1 substrate-binding domain 99 282 - -
Apr10g2052 372 SUPERFAMILY Nucleotidyltransferase 31 92 IPR043519 -
Apr10g2052 372 MobiDBLite consensus disorder prediction 336 353 - -
Apr10g2052 372 PANTHER PROTEIN HESO1 1 47 - -
Apr10g2052 372 PANTHER PROTEIN HESO1 46 352 - -
Apr10g2052 372 PANTHER POLY A POLYMERASE CID PAP -RELATED 46 352 - -
Apr10g2052 372 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 47 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2052 - - ccaj:109788017 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2052 10 33322273 33328316 Apr10g2052 10 33322273 33328316 ECH