Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2050 ATGGCAGCTGCGAAGAACGGTAACCAGAGAGCCTTAAGATGGTCCCTTAACGGAATCACTGCTCTCGTCACAGGTGGAACTCGTGGAATTGGGCATGCCATAGTGGAAGAGTTATGTGGGTTTGGTGCCACCGTCCACACTTGTTCCAGAAACCAAGCTGAACTTGATAAGTGTTTGGATCAATGGCGTAGTAAGGGCTTTTTGGTTTCTGGGTCAGTGTGTGATGTGTCATCTCCACCCCAAAGAGAGAAACTCATTAAGGATGTCACTTCCATCTTCAATGCCAAGCTTAACATTTATGTGAACAATGTTGGAGCAAACTACAGGAAGCCAACCACTGAGTACTCTGCTGAAGACTATTCAGAAATGATGGCAATTAATTTAGACTCTGCTCACCATCTGTGCCAACTTGCATACCCTCTTCTAAAAGCATCTGGAATGGGAAGCATTGTGTTCATTTCATCTATTGCTGGCGTGGTGAGCTTAGGTACTGGATCTATCTATGCAGCATGTAAAGCTGCAATCAATCAGCTTACAAAATATCTGGCTTGTGAATGGGCTAAAGACAACATAAGGAGTAATTGTGTTGTTCCTGCTACTACAAACACACCACTTGTTGAACATGTAAGGCTCTTGCTTCTTATTGCATATGTAGATGAAATGTTGTCTCGAACTCCTCTCGGCCGCATCGCGGAAGCCGAAGAAGTGTCATCCTTGGTGGCTTTCCTTTGTCTGCCTGCTGCCTCTTACATCACAGGACAGGTTATTTGTGTTGATGGAGGGTTAACTGTGAATGGATTTCAACCCAGCATGAGATTAACATGA 825 0.4448 MAAAKNGNQRALRWSLNGITALVTGGTRGIGHAIVEELCGFGATVHTCSRNQAELDKCLDQWRSKGFLVSGSVCDVSSPPQREKLIKDVTSIFNAKLNIYVNNVGANYRKPTTEYSAEDYSEMMAINLDSAHHLCQLAYPLLKASGMGSIVFISSIAGVVSLGTGSIYAACKAAINQLTKYLACEWAKDNIRSNCVVPATTNTPLVEHVRLLLLIAYVDEMLSRTPLGRIAEAEEVSSLVAFLCLPAASYITGQVICVDGGLTVNGFQPSMRLT* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2050 274 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 8 271 - -
Apr10g2050 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Apr10g2050 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Apr10g2050 274 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Apr10g2050 274 Pfam Enoyl-(Acyl carrier protein) reductase 27 263 - -
Apr10g2050 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 265 IPR036291 -
Apr10g2050 274 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Apr10g2050 274 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Apr10g2050 274 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Apr10g2050 274 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Apr10g2050 274 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Apr10g2050 274 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Apr10g2050 274 PANTHER TROPINONE REDUCTASE 8 271 IPR045000 GO:0016491
Apr10g2050 274 Gene3D - 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2050 Apr-Chr10 33304833 33308024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2050 13 269 Miscellaneous Gene Families AT2G29290 63.320 2.29e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2050 K08081 - gmx:100775806 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2050 10 33304833 33308024 Apr10g2050 10 33304833 33308024 ECH