Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2047 ATGGGACGTCTAAAGCTGCAAGCTGGTATCAATGCAATAGAGGAGGAGGAACCTGAGGAATGTGATCCTGCCTATCCTAACAAAACAACTTTAGCATGCATGATCAATTCAGAAATCGGTGCTGTTTTGGCAGTCATGAGACGAAATGTAAGATGGGGAGGTCGTTATATATCAGGTGATGATCAGCTGGAACACTCTCTCATTCAGTCTTTCAAGACAGTAAGGCGGCAAATCTTTTCATGGCACCACCATCAGTGGCAAGCTATCAACCCTGCCTTATATCTGCAGCCATTTTTAGATGTGATTAGGTCTGATGAAACCGGTGCAGCTATTACTGGTGTTGCTTTGTCATCTGTTTACAAGATCATGACTCTTGATGTGATCGATCAAAATACTGTCAACGTTGAGGATGCTATGCGCTTGGTGGTTGATGCCGTCACTAGCTGCAGATTTGAGGTTACTGATCCTTCTTCAGAAGAAGTTGTTTTAATGAAGATACTACAAGTTCTCCTAGCATGTATGAAAAGTAAAGCATCTATAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACCTGTTTCCGAATAGTTCATCAAGCAGGATCTAAAGGTGAGTTGTTGCAGCAGATAGCACGACACACAATGCATGAACTTGTAAGGTGTATTTTCTCACACCTTCAAGATGTTGACAACACAGACCATGCATTGGTTAATGGGAGCTCTAATTTGAAACAGGAGACTGGAGGCCTAAATAATGAGTATGCTTTTGGAAGTAGACAATTGGAGAATGGAAGCATGAATTCTGAATTTGATAATCAGCCATTAGCCACAAACTTTGCTCCCAATGCCACAAGTGTTGTGAAAGCAACTGTGATGGATGAAAACACAGCGTTAGCTATTAGTGGCAAGGAGGGTGTACCATATGATATGCATCTTATGACTGAACCATATGGTGTTCCTTGTATGGTTGAAATATTTCACTTTTTGTGTTCTTTGCTGAATGTTGTCGAGCATACAGGAATGGGCCCTAGATCAAACACTTTATCATTTGATGAAGATGTGCCGCTCTTTGCCTTAACATTAATTAATTCGGCAATAGAACTTGGAGGGCCTTCTATTTGTCGTCACCCAAGGTTGCTGAGCTTAATTCAGGATGAATTGTTTCACAATCTGATGCAATTTGGTTTGTCGATGAGTCCCCTTATACTTTCAACGGTGTGTAGCATTGTTCTCAATCTGTATCATCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCATGTGTCATTTTGAGACTTGCACAAAGTAGATATGGAGCTTCATACCAGCAGCAAGAGGTAGCCATGGAGGCCCTTGTTGATTTCTGCAGGCAAAAGACATTTATGGTAGATATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAATTGTCCATTGTCTACCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAGCCAATGGATCTGTAAGCTCAGAATATTCTCCGGTGAATCTTGAAGAGTATACCCCATTCTGGATGGTTAAATGTGAGAATTATAATGATCCAAATAATTGGGTTCCTTTTGTCCGCCGAAGAAAGTATATAAAAAGAAGATTGATGATTGGTGCTGACCACTTTAATCGTGATCCTAAGAAAGGTTTAGAGTTTCTCCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGATTGGATAAGAATCTTGTTGGTGATTTCCTAGGAAATCATGATGAATTTTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGACACAGCCCTGCGTCTATTCTTGGAGACTTTCAGATTGCCTGGAGAGTCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAGCAGTCACCACATATCCTGGCCAATAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTCAATACAGATCAGCACAATGTGCAGGTGAAAAAGAAGATGACTGAAGAGGATTTTATCCGGAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAATTTCTATCAGAGATTTACCATTCAATTTGTAAAAATGAAATCCGCACAACACCTGAACAAGGTTTTGGATTTCCTGAAATGACACCAAGTCGATGGATTGATCTAATGCATAAGTCAAAAAAAACTGCTCCATTTATCCTATCTGATTCCAAGGCCTACCTTGATCATGACATGTTTGCCATAATGTCAGGCCCAACAATTGCTGCCATCTCTGTGGTATTTGATCATGCTGAACAGGAAGAGGTATACCAAACATGTATGGATGGATTCTTAGCTATTGCCAAGATATCAGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTGTCTCTGTGTAAGTTCACTACACTTTTGAACCCATCATCAGTTGAGGAACCAGTCCTTGCCTTTGGCGATGACATGAAAGCAAGAATGGCAACTGTGACAGTATTCACTATAGCAAACAGGTATGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGATTGCACAAGCTTGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGAGTCAGAGCTCTCTGCTGAAACTGTGCATGGAAAGCCTATCATGAATTCTTTATCCTCAGCTCATATGCAATCTATTGGCACTCCAAGGAGATCCTCGGGATTGATGGGTAGGTTTAGTCAACTCTTATCTCTTGACACTGAGGAGCCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTGCAAACAATACAGAAGTGTCACATTGACAGCATATTCACTGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTTGCAAGAGCACTCATTTGGGCAGGGCGACCTCAGAAAGGGAACAGCACACCTGAGGATGAAGATACTGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGAGATAGAATTGGGATTCTTTGGCAGGGTGTGTATGAGCACATATCCAATATTGTTCAGTCAACTGTAATGCCTTGTGCCCTGGTAGAGAAAGCTGTTTTTGGACTCTTGCGGATTTGCCAGCGGTTGCTTCCCTACAAGGAGAATGTTGCTGATGAACTTCTGAGGTCATTGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCAGATGCATATTGTGAGCAGATTACTCAGGAAGTCAGTCGCCTTGTGAAGGCAAATGCTTCTCATATAAGATCTCAGTTAGGATGGCGCACAATTACATCACTACTTTCCATCACAGCTAGACACATAGAAGCATCCGAGGCTGGGTTTGATGCACTATTGTTTATAATGTCCGATGGCGCCCACTTGCTTCCAGCTAATTATGTTCTCTGTGTAGATACTGCCAGGCAGTTTGCTGAGTCTCGTGTTGGACAAGCAGAGCGATCTGTACGGGCACTTGATCTCATGGCAGGTTCTGTCAATTGCTTGGTCCGGTGGACTAGTGAGGCTAAGGAAACAATAGAGGAGGAGCAAGTGTCTAAGCTGTCTCAGGATATCGGAGAGATGTGGTTGAGACTAGTACAGGGTCTGCGGAAGGTATGTTTAGACCAGAGAGAAGAGGTTAGAAATCATGCTTTATTATCTCTGCAGAAGTGCCTGACAGGAGCCGATGGCATTTATCTCCCGTATGGCTTGTGGTTACAATGCTTTGATCTTGTGATCTTCACGGTGCTGGATGACCTGCTTGAGATTGCACAGGGACACTCTCAGAAGGACTACCGCAACATGGAAGGCACACTTATCTTAGCAATGAAGCTCTTGTCCAAAGTTTTTCTTCAATTACTCCCAGAGTTATCCCAATTGACAACCTTCTGCAAGCTATGGTTAGGTGTACTAAGCAGAATGGAAAAATATATGAAGGTGAAGGTTAGGGGGAAAAGAAGTGACAAGCTTCAAGAGATAGTGCCTGAGCTGCTTAAAAACTCCTTGCATGCTATGAAGATGAAGGGTATACTGGCACAGAGGAGTGCCTTGGGTGGTGATAGTCTGTGGGAACTAACATGGCTACATGTGAATAACATTTCGCCATCATTGCAACTTGAGGTATTCCCTGAGCACAAACAAGGTGAATCAATAGGAGTTTTGCGGCCTGATGAAATAGGGTCTGTTCCTTCAAGTGAAACAGCAAGCCGGGAAGATGCTGGCATTGTTGGTTAA 4398 0.4225 MGRLKLQAGINAIEEEEPEECDPAYPNKTTLACMINSEIGAVLAVMRRNVRWGGRYISGDDQLEHSLIQSFKTVRRQIFSWHHHQWQAINPALYLQPFLDVIRSDETGAAITGVALSSVYKIMTLDVIDQNTVNVEDAMRLVVDAVTSCRFEVTDPSSEEVVLMKILQVLLACMKSKASIMLSNQHVCTIVNTCFRIVHQAGSKGELLQQIARHTMHELVRCIFSHLQDVDNTDHALVNGSSNLKQETGGLNNEYAFGSRQLENGSMNSEFDNQPLATNFAPNATSVVKATVMDENTALAISGKEGVPYDMHLMTEPYGVPCMVEIFHFLCSLLNVVEHTGMGPRSNTLSFDEDVPLFALTLINSAIELGGPSICRHPRLLSLIQDELFHNLMQFGLSMSPLILSTVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSTMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYNDPNNWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSEIYHSICKNEIRTTPEQGFGFPEMTPSRWIDLMHKSKKTAPFILSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEQEEVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPIMNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENVADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHIEASEAGFDALLFIMSDGAHLLPANYVLCVDTARQFAESRVGQAERSVRALDLMAGSVNCLVRWTSEAKETIEEEQVSKLSQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCLTGADGIYLPYGLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLILAMKLLSKVFLQLLPELSQLTTFCKLWLGVLSRMEKYMKVKVRGKRSDKLQEIVPELLKNSLHAMKMKGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEHKQGESIGVLRPDEIGSVPSSETASREDAGIVG* 1466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2047 1465 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1435 - -
Apr10g2047 1465 MobiDBLite consensus disorder prediction 1443 1465 - -
Apr10g2047 1465 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Apr10g2047 1465 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
Apr10g2047 1465 Gene3D - 644 760 IPR023394 -
Apr10g2047 1465 Gene3D - 561 643 - -
Apr10g2047 1465 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Apr10g2047 1465 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1435 - -
Apr10g2047 1465 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Apr10g2047 1465 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Apr10g2047 1465 SUPERFAMILY Sec7 domain 565 755 IPR035999 GO:0005085|GO:0032012
Apr10g2047 1465 SUPERFAMILY ARM repeat 116 1339 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2047 Apr-Chr10 33278662 33286099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2047 K18443 - gmx:100780239 2756.86