Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2044 ATGTCCAACTCAGAGAGCAGTAGCACAGGTTCGAGATGGTCTCTCAAGGGAACCACTGCGCTCGTTACTGGAGGAACACGTGGAATTGGGCACGCTGTGGTGGAGGAACTTGCGGAGTTTGGTGCCAGTGTGTACACTTGTTCTAGGAATGAAGATGAGCTGAATGCGTGCTTGAAGGAGTGGAAAAAGAAGGGGTTTTCGGTTTCTGGGTCTGTTTGTGATGCCTCTTCTCCACCTCAAAGGGAGAACCTCATTCAACAAGTGACTTCTACCTTCAATGGCAAGCTCAACATTCTTGTAAATAATGTCGGAACAAATGTGCGGAAGCCAACAATTGAGTATACAGCTGAAGAATATTCAAAATTGATGACAACCAACTTGGACTCTGCATACCATCTGAGCCAACTTACATACTCTCTTCTTAAAGCATCTGGAAATGGAAGCATCGTCTTCATTTCCTCTGTTGCAAGTCTGACAAGCGTAGGTTCTGGAACCATTTATGCAGCAACTAAAGCTGCAATCAATCACCTTACCAAATATCTTGCTTGTGAATGGGCCAAAGACAACATAAGAAGTAACTGTGTTGCACCCTGGTATACCAAAACGCCACTTGCGGAACCTATGCTTGCTAAAAAAGAGTTTGTGAATGAGGTATTATCTCGAACACCAATAAAGCGAATTGCAGAAACACATGAAGTGTCATCCTTGGTCACTTTCCTCTGCCTGCCAGCGGCGTCCTACATCACTGGGCAGATTGTTTCAGTTGATGGAGGATTCACTGCCAATGGATTTCAACCCAGCATGATTTCTTAA 813 0.4465 MSNSESSSTGSRWSLKGTTALVTGGTRGIGHAVVEELAEFGASVYTCSRNEDELNACLKEWKKKGFSVSGSVCDASSPPQRENLIQQVTSTFNGKLNILVNNVGTNVRKPTIEYTAEEYSKLMTTNLDSAYHLSQLTYSLLKASGNGSIVFISSVASLTSVGSGTIYAATKAAINHLTKYLACEWAKDNIRSNCVAPWYTKTPLAEPMLAKKEFVNEVLSRTPIKRIAETHEVSSLVTFLCLPAASYITGQIVSVDGGFTANGFQPSMIS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2044 270 Gene3D - 2 264 - -
Apr10g2044 270 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Apr10g2044 270 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Apr10g2044 270 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Apr10g2044 270 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Apr10g2044 270 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Apr10g2044 270 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Apr10g2044 270 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Apr10g2044 270 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Apr10g2044 270 PANTHER TROPINONE REDUCTASE 4 267 IPR045000 GO:0016491
Apr10g2044 270 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Apr10g2044 270 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Apr10g2044 270 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Apr10g2044 270 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2044 Apr-Chr10 33256258 33259739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g2044 12 266 Miscellaneous Gene Families AT2G29290 61.089 2.93e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2044 K08081 - gmx:100819646 467.618