Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2038 ATGTCATTATTAATCTCCTCAGTGGTTGATTTTATTATAGGAAATATGGGTTCGAATCTGGAACCAGTGCCAATCACTTCTCAGAAACATGACCCGGCATGGAAGCATGTTCAGATGTTTAAGAATGGGGACAAGGTGCAGCTTAAGTGCATATATTGTCTCAAGATGTTCAAAGGTGGTGGGATTCATAGGATTAAGGAACACCTTGCTTGTCAGAAAGGGAATGCTTCCACTTGTAGCCGTGTTCCTTATGATGTTAGGCTTCATATGCAGCAGAGCTTGGATGGGGTTGTGGTGAAAAAGAGGAAGAAGCAGAAAATTGAGGAGGAGATTATGAATGTTAATCCTTTGGCTACTGTTGTCAACCCTGTGGCTAATCAGGTGGATGTGAATCAGGGGCTTCAGGCTATTGGAGTGCACAATTCAGTGGAGCACAATTCAAGTTTGCTAGTGAATCATGGTGAAGGAATGAGTAAAAATATAGAAAGAAGGAAGAAGATAAGAGCCAGCAAGAATGCTGCACCAGTTTATGCAAACTCTGAGGGTGTTGTTGGTGTGGAGAAGAATGCCTTGTTCTCCAAGAAGATGGACAATCACATTCATATGGCAATTGGTAGGTTTTTGTATGATATTGGTGCACCTTTTGATGCTGTGAACTCAATCTATTTTCAGCAAATGGTTGACGCTATTGCTTCGAGGGGGCCGGGTTTTGAACGGCCCTCACACCACGAACTTCGGGGTTGGATCCTGAAAAACTCTGTGGAGGAAGTGAAGAATGATATAGATAGATGCAAGATGACTTGGGGGAGGACTGGCTGTTCCATTTTGGTTGACCAATGGACATCAGAAACAGGAAGAATACTGATAAGTTTTTTGGCATATTGTCCTGAAGGCATAGTCTTTTTGAAATCCTTGGATGCAACTGAGATTTCAACATCTGCAGAATTTCTGTATGAGTTGATAAAACAAGTAGTAGAAGAAGTTGGAGTTGGGCATGTACTGCAAGTGATTACATCAGGGGAAGAACTATATGCGATTGCTGGGAGACGGTTGACTGATACTTTTCCTACCCTTTATTGGAGCCCTTCTGCAGCTCACTACATTGATTTGATACTTAAAGATTTTGGAAATCTTGACTGGATTAGTGCAGTGATTGAACAAGCTAAATCTATAACAAGATTTGTCTACAATTATAGTGCAATTTTGAATATGGTTAAAAGGTATACCTTAGGGAATGATATTGTGGATCCCTCTTTCTCACGCTTTGCAACAAATTTTACCACATTGAAGAGGATGGTTGATCTTAAACACAATTTGCAGGCCTTGGTCACTTCTCAGGAGTGGGTGGATTGCCCATTTTCAAAGAAACCAGCAGGTCTCGAAATGTTAGATTGCCTAAGCAATCAAACATTTTGGTCCTCATGTGACATGATAGTTCGTCTAACAGCTCCTCTCTTAAAAGTTCAGAGAATAGCTGGTAGTGAGATGAGACCTGCAATAGGGTACGTTTATGCTGGAATGTACCGGGCAAAAGAAGCAATTAAGAAAGCACTTGTGAAGAGGGAGGATTATATGGTGTACTGGAGTATTATACATCATAGATGGGAAAGGCTGTGGCATCATCCTCTTCATGCTGCAGGCTTCTACCTTAATCCTAAGTTCTTCTATAGTATTCAAGGGGATATGCACAGCGAGATTCTCTCAGGGATGTTTGATTGCATAGAGAGATTAGTACCAGATACAAGAGTCCAAGACAAAATTATAAAAGAGATAAACTTATACAAGTCTGCTGCAGGAGACTTTGGGAGAAAGATGGCAGTCAGAGCTAGAGATAATCTGCTTCCTTCTGAATGGTGGTCAACATATGGAGGAGGCTGCCCTAACTTGTCACGTTTAGCAATTCGTATTCTCAGCCAAACATCCAGTGTGATGTCCTGCAAGAGAAACCAGATTCCTTTTGAACAAATAATCAACACAAGGAATTATATAGAGCGCCAGCATCTTACTGATCTTATCTTTGTTCACTGCAACTTACGATTAAGACAAATGTTAATGAGTAAAGAACAAGATTCCAGTGACCCCCTATCATTTGACAGCATTAGTAACGTTGAAGACTGGATTGGGCCAAGGGATTTGTACTTAGAAGAGTATGGGAACTCAGATTGGATGGCACTGGATCCATCTTCTGTTAACACAATGCTGTTAAGGCCTTTAAATGATGAAGCAGAAGAATTGGGTGAAGGGTTTGATGATCATGAGATTTTCAGTTTTGTGAAAGATAGCGAGGATGAAAATACTGGAGACAAGTTGGTAAACCATTAG 2322 0.4087 MSLLISSVVDFIIGNMGSNLEPVPITSQKHDPAWKHVQMFKNGDKVQLKCIYCLKMFKGGGIHRIKEHLACQKGNASTCSRVPYDVRLHMQQSLDGVVVKKRKKQKIEEEIMNVNPLATVVNPVANQVDVNQGLQAIGVHNSVEHNSSLLVNHGEGMSKNIERRKKIRASKNAAPVYANSEGVVGVEKNALFSKKMDNHIHMAIGRFLYDIGAPFDAVNSIYFQQMVDAIASRGPGFERPSHHELRGWILKNSVEEVKNDIDRCKMTWGRTGCSILVDQWTSETGRILISFLAYCPEGIVFLKSLDATEISTSAEFLYELIKQVVEEVGVGHVLQVITSGEELYAIAGRRLTDTFPTLYWSPSAAHYIDLILKDFGNLDWISAVIEQAKSITRFVYNYSAILNMVKRYTLGNDIVDPSFSRFATNFTTLKRMVDLKHNLQALVTSQEWVDCPFSKKPAGLEMLDCLSNQTFWSSCDMIVRLTAPLLKVQRIAGSEMRPAIGYVYAGMYRAKEAIKKALVKREDYMVYWSIIHHRWERLWHHPLHAAGFYLNPKFFYSIQGDMHSEILSGMFDCIERLVPDTRVQDKIIKEINLYKSAAGDFGRKMAVRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMSCKRNQIPFEQIINTRNYIERQHLTDLIFVHCNLRLRQMLMSKEQDSSDPLSFDSISNVEDWIGPRDLYLEEYGNSDWMALDPSSVNTMLLRPLNDEAEELGEGFDDHEIFSFVKDSEDENTGDKLVNH* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2038 773 Pfam hAT family C-terminal dimerisation region 599 677 IPR008906 GO:0046983
Apr10g2038 773 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 19 747 - -
Apr10g2038 773 SUPERFAMILY Ribonuclease H-like 272 680 IPR012337 -
Apr10g2038 773 Pfam Protein of unknown function (DUF 659) 240 391 IPR007021 -
Apr10g2038 773 ProSiteProfiles Zinc finger BED-type profile. 28 86 IPR003656 GO:0003677
Apr10g2038 773 PANTHER OSJNBA0013A04.12 PROTEIN 19 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2038 Apr-Chr10 33215467 33219407 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2038 - - aprc:113850304 1560.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g2038 10 33215467 33219407 Apr10g2038 10 33215467 33219407 ECH