Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2004 ATGATGGAAATAAGTATTACAAGGTGTCATCTTGAAACACAAGGTCCTTTTTTTTCAAATATTTCAAGAATAGGATGGGAAAGCGCTAAGAAACTTCCATATAATGTACCTGCCCAGAGTTCAAGATGGAACTTTCACAGATTGGCCTCTTCCTGCCAAGCTTTTACTTCAGTGTATCCAAGAGGGCCTTTTATTTGTAGAGCAAATTCAATGCCAATTAGTTTAGAGGGATCTGTGTCATTACAATCTGGAGATAATTATAGTGAGGATGAGGATTCATCGGTAGACTCAGAAGAGGAGGCTTTGGCACAATCACTTACCAGTGAACAGATAATGGGACTGCTAGCTGACACACACAGAGAAAAACTCACCAAGAAACTTAGTGAAGCCAACATGCAAAATCGATTCCTCAAAAGACAGTTGCATGTAAAGGAGGACGCATTGGTAAAATTTAAAAGTGAACTTGCTGACATGGAGCTTGAAATTCAGGCTTTGGTCAGACTAGCAGAAGAAGTAGCTCAATCTGGTATTCCAGAAGGTTCACGGAAGATCAATGGAAAGTACATTCACTCTCACCTTGTTGCTAGATTAGAAGCGGTGAATGAACAATTGAAGGAACAAATAAAGGATGTTGATGTGGCACAATCGAAGGAGGTTTCTGTTTTTTGGTTTGGCATGGCTGAGAGCGTGCAAGTTATGGGCAATTTTGATGGCTGGAGCCAAGGGGAGCACCTTTCTCCTGAGTATACAGGTTCTTATGCAAGGTTCTCAACAACATTGATGCTTAGGCCTGGAAGGTATGAAATCAAATTCTTAGTAGATGGTGAATGGCAGCTGTCAACAGAGTTCCCTATTGTTGGTGAAGGGTTAACGAAAAATAATTTGTTAGTTGTTGAGTAA 900 0.4044 MMEISITRCHLETQGPFFSNISRIGWESAKKLPYNVPAQSSRWNFHRLASSCQAFTSVYPRGPFICRANSMPISLEGSVSLQSGDNYSEDEDSSVDSEEEALAQSLTSEQIMGLLADTHREKLTKKLSEANMQNRFLKRQLHVKEDALVKFKSELADMELEIQALVRLAEEVAQSGIPEGSRKINGKYIHSHLVARLEAVNEQLKEQIKDVDVAQSKEVSVFWFGMAESVQVMGNFDGWSQGEHLSPEYTGSYARFSTTLMLRPGRYEIKFLVDGEWQLSTEFPIVGEGLTKNNLLVVE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2004 299 CDD E_set_AMPKbeta_like_N 218 298 - -
Apr10g2004 299 Coils Coil 194 217 - -
Apr10g2004 299 Coils Coil 120 175 - -
Apr10g2004 299 Pfam Glycogen recognition site of AMP-activated protein kinase 220 296 IPR032640 -
Apr10g2004 299 Gene3D Immunoglobulins 209 298 IPR013783 -
Apr10g2004 299 PANTHER PROTEIN PTST, CHLOROPLASTIC 3 299 - -
Apr10g2004 299 SUPERFAMILY E set domains 219 298 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2004 Apr-Chr10 32933069 32940044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2004 - - gmx:100806282 472.241